{
    "type": "genome",
    "identifier": "GCA_902762495.1",
    "organism": "uncultured bacterium",
    "title": "uncultured bacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "THE ROSLIN INSTITUTE",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_902762495.1",
        "bioproject": "PRJEB31266",
        "biosample": "SAMEA6148903",
        "wgs_master": "CACWOL000000000.1",
        "refseq_category": "na",
        "taxid": "77133",
        "species_taxid": "77133",
        "organism_name": "uncultured bacterium",
        "infraspecific_name": "",
        "isolate": "RUG10770",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/02/17",
        "asm_name": "Rumen uncultured genome RUG10770",
        "submitter": "THE ROSLIN INSTITUTE",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/902/762/495/GCA_902762495.1_Rumen_uncultured_genome_RUG10770",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-02-17",
    "dateModified": "2020-02-17",
    "datePublished": "2020-02-17",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured bacterium"
        ],
        "sample_taxid": [
            "77133"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "United Kingdom"
        ],
        "sample_host_location_id": [],
        "data_size": "0.773 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2755250",
        "Number of Sequences": "96",
        "Longest Sequences (bp)": "107361",
        "N50 (bp)": "50119",
        "Gap Ratio (%)": "0.010562",
        "GCcontent (%)": "59.5",
        "Number of CDSs": "2173",
        "Average Protein Length": "362.0",
        "Coding Ratio (%)": "85.7",
        "Number of rRNAs": "2",
        "Number of tRNAs": "39",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Victivallis vadensis",
                "strain": "strain=DSM 14823",
                "accession": "GCA_003096415.1",
                "taxid": 172901,
                "species_taxid": 172901,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 93,
                "total_fragments": 870,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Victivallis lenta",
                "strain": "strain=BBE-744-WT-12",
                "accession": "GCA_009695545.1",
                "taxid": 2606640,
                "species_taxid": 2606640,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.3504,
                "matched_fragments": 97,
                "total_fragments": 870,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
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                "accession": "GCA_902762495.1",
                "gtdb_species": "s__UBA1732 sp902762495",
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                "total_fragments": 870,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Lentisphaeria;o__Victivallales;f__UBA1829;g__UBA1732",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.94",
                "min_intra_species_ani": "97.57",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 5,
                "status": "conclusive"
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            {
                "accession": "GCA_902774245.1",
                "gtdb_species": "s__UBA1732 sp902774245",
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                "matched_fragments": 739,
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                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Lentisphaeria;o__Victivallales;f__UBA1829;g__UBA1732",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902778895.1",
                "gtdb_species": "s__UBA1732 sp902778895",
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                "matched_fragments": 775,
                "total_fragments": 870,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Lentisphaeria;o__Victivallales;f__UBA1829;g__UBA1732",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016285345.1",
                "gtdb_species": "s__UBA1732 sp016285345",
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                "matched_fragments": 714,
                "total_fragments": 870,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Lentisphaeria;o__Victivallales;f__UBA1829;g__UBA1732",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900320095.1",
                "gtdb_species": "s__UBA1732 sp900320095",
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                "matched_fragments": 711,
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                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Lentisphaeria;o__Victivallales;f__UBA1829;g__UBA1732",
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                "mean_intra_species_ani": "98.17",
                "min_intra_species_ani": "95.72",
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                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCA_017524965.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Lentisphaeria;o__Victivallales;f__UBA1829;g__UBA1732",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_017455665.1",
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                "total_fragments": 870,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Lentisphaeria;o__Victivallales;f__UBA1829;g__UBA1732",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902780135.1",
                "gtdb_species": "s__UBA1732 sp902780135",
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                "matched_fragments": 685,
                "total_fragments": 870,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Lentisphaeria;o__Victivallales;f__UBA1829;g__UBA1732",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017963105.1",
                "gtdb_species": "s__UBA1732 sp017963105",
                "ani": 89.3045,
                "matched_fragments": 660,
                "total_fragments": 870,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Lentisphaeria;o__Victivallales;f__UBA1829;g__UBA1732",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Verrucomicrobiota",
        "c__Lentisphaeria",
        "o__Victivallales",
        "f__UBA1829",
        "g__UBA1732",
        "s__UBA1732 sp902762495"
    ],
    "_genome_taxon": [
        "uncultured",
        "bacterium",
        "d__Bacteria",
        "p__Verrucomicrobiota",
        "c__Lentisphaeria",
        "o__Victivallales",
        "f__UBA1829",
        "g__UBA1732",
        "s__UBA1732 sp902762495",
        "Bacteria",
        "Verrucomicrobiota",
        "Lentisphaeria",
        "Victivallales",
        "UBA1829",
        "UBA1732",
        "UBA1732",
        "sp902762495"
    ],
    "_meo": [
        {
            "id": "MEO_0000046",
            "label": "rumen"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}