{ "type": "genome", "identifier": "GCA_902767085.1", "organism": "uncultured Spirochaetaceae bacterium", "title": "uncultured Spirochaetaceae bacterium", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "THE ROSLIN INSTITUTE", "publication": [ {} ], "properties": { "assembly_accession": "GCA_902767085.1", "bioproject": "PRJEB31266", "biosample": "SAMEA6149363", "wgs_master": "CACXGD000000000.1", "refseq_category": "na", "taxid": "201186", "species_taxid": "201186", "organism_name": "uncultured Spirochaetaceae bacterium", "infraspecific_name": "", "isolate": "RUG11229", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/02/15", "asm_name": "Rumen uncultured genome RUG11229", "submitter": "THE ROSLIN INSTITUTE", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/902/767/085/GCA_902767085.1_Rumen_uncultured_genome_RUG11229", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-02-15", "dateModified": "2020-02-15", "datePublished": "2020-02-15", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Spirochaetaceae bacterium" ], "sample_taxid": [ "201186" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "United Kingdom" ], "sample_host_location_id": [], "data_size": "0.621 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 98.48, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, 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"below_threshold" } ], "cc_result": { "completeness": 98.48, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_900167025.1", "gtdb_species": "s__Treponema_D berlinense", "ani": 98.8607, "matched_fragments": 675, "total_fragments": 709, "gtdb_taxonomy": "d__Bacteria;p__Spirochaetota;c__Spirochaetia;o__Treponematales;f__Treponemataceae;g__Treponema_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.85", "min_intra_species_ani": "98.81", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.90", "num_clustered_genomes": 4, "status": "conclusive" }, { "accession": "GCA_002477955.1", "gtdb_species": "s__Treponema_D sp002477955", "ani": 93.6355, "matched_fragments": 595, "total_fragments": 709, "gtdb_taxonomy": "d__Bacteria;p__Spirochaetota;c__Spirochaetia;o__Treponematales;f__Treponemataceae;g__Treponema_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.57", "min_intra_species_ani": "99.37", 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