{
    "type": "genome",
    "identifier": "GCA_902770105.1",
    "organism": "uncultured Prevotellaceae bacterium",
    "title": "uncultured Prevotellaceae bacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "THE ROSLIN INSTITUTE",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_902770105.1",
        "bioproject": "PRJEB31266",
        "biosample": "SAMEA6149666",
        "wgs_master": "CACXRN000000000.1",
        "refseq_category": "na",
        "taxid": "370804",
        "species_taxid": "370804",
        "organism_name": "uncultured Prevotellaceae bacterium",
        "infraspecific_name": "",
        "isolate": "RUG11532",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/02/17",
        "asm_name": "Rumen uncultured genome RUG11532",
        "submitter": "THE ROSLIN INSTITUTE",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/902/770/105/GCA_902770105.1_Rumen_uncultured_genome_RUG11532",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-02-17",
    "dateModified": "2020-02-17",
    "datePublished": "2020-02-17",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Prevotellaceae bacterium"
        ],
        "sample_taxid": [
            "370804"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "United Kingdom"
        ],
        "sample_host_location_id": [],
        "data_size": "0.865 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 60.42,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3007888",
        "Number of Sequences": "68",
        "Longest Sequences (bp)": "334142",
        "N50 (bp)": "84809",
        "Gap Ratio (%)": "0.004156",
        "GCcontent (%)": "47.5",
        "Number of CDSs": "2484",
        "Average Protein Length": "363.5",
        "Coding Ratio (%)": "90.1",
        "Number of rRNAs": "0",
        "Number of tRNAs": "46",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Prevotella ruminicola",
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                "taxid": 839,
                "species_taxid": 839,
                "relation_to_type": "type",
                "validated": true,
                "ani": 83.1359,
                "matched_fragments": 596,
                "total_fragments": 969,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella ruminicola",
                "strain": "strain=ATCC 19189",
                "accession": "GCA_900108375.1",
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                "species_taxid": 839,
                "relation_to_type": "type",
                "validated": true,
                "ani": 83.0057,
                "matched_fragments": 597,
                "total_fragments": 969,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella brevis",
                "strain": "strain=ATCC 19188",
                "accession": "GCA_000621725.1",
                "taxid": 83231,
                "species_taxid": 83231,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.8237,
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                "total_fragments": 969,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella copri",
                "strain": "strain=DSM 18205",
                "accession": "GCA_025151535.1",
                "taxid": 165179,
                "species_taxid": 165179,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 77.0452,
                "matched_fragments": 106,
                "total_fragments": 969,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella copri",
                "strain": "strain=DSM 18205",
                "accession": "GCA_009495405.1",
                "taxid": 165179,
                "species_taxid": 165179,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 77.0354,
                "matched_fragments": 104,
                "total_fragments": 969,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella copri",
                "strain": "strain=DSM 18205",
                "accession": "GCA_000157935.1",
                "taxid": 165179,
                "species_taxid": 165179,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 76.9966,
                "matched_fragments": 107,
                "total_fragments": 969,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella stercorea",
                "strain": "strain=DSM 18206",
                "accession": "GCA_000235885.1",
                "taxid": 363265,
                "species_taxid": 363265,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 76.6071,
                "matched_fragments": 79,
                "total_fragments": 969,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella albensis",
                "strain": "strain=JCM 12258",
                "accession": "GCA_000613525.1",
                "taxid": 77768,
                "species_taxid": 77768,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.3098,
                "matched_fragments": 60,
                "total_fragments": 969,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella albensis",
                "strain": "strain=DSM 11370",
                "accession": "GCA_000426565.1",
                "taxid": 77768,
                "species_taxid": 77768,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.2765,
                "matched_fragments": 61,
                "total_fragments": 969,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Xylanibacter rodentium",
                "strain": "strain=PROD",
                "accession": "GCA_013166575.1",
                "taxid": 2736289,
                "species_taxid": 2736289,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.1748,
                "matched_fragments": 72,
                "total_fragments": 969,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Hallella faecis",
                "strain": "strain=CLA-AA-H145",
                "accession": "GCA_018789675.1",
                "taxid": 2841596,
                "species_taxid": 2841596,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.0445,
                "matched_fragments": 71,
                "total_fragments": 969,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella buccae",
                "strain": "strain=ATCC 33574",
                "accession": "GCA_000184945.1",
                "taxid": 28126,
                "species_taxid": 28126,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.6901,
                "matched_fragments": 56,
                "total_fragments": 969,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 60.42,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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        "gtdb_result": [
            {
                "accession": "GCA_900317405.1",
                "gtdb_species": "s__Prevotella sp900317405",
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                "matched_fragments": 717,
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.52",
                "min_intra_species_ani": "98.08",
                "mean_intra_species_af": "0.89",
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                "num_clustered_genomes": 6,
                "status": "conclusive"
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            {
                "accession": "GCA_902761905.1",
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                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_900322175.1",
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                "matched_fragments": 607,
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                "mean_intra_species_ani": "100.00",
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                "mean_intra_species_af": "0.99",
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                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_002351725.1",
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                "matched_fragments": 562,
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
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                "mean_intra_species_ani": "96.82",
                "min_intra_species_ani": "95.50",
                "mean_intra_species_af": "0.81",
                "min_intra_species_af": "0.76",
                "num_clustered_genomes": 9,
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            },
            {
                "accession": "GCA_902800365.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
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                "mean_intra_species_ani": "N/A",
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            {
                "accession": "GCF_000702825.1",
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            {
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        ]
    },
    "_bac2feature": {
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    ],
    "_genome_taxon": [
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        "bacterium",
        "d__Bacteria",
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        "f__Bacteroidaceae",
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        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Bacteroidales",
        "Bacteroidaceae",
        "Prevotella",
        "Prevotella",
        "sp900317405"
    ],
    "_meo": [
        {
            "id": "MEO_0000046",
            "label": "rumen"
        }
    ],
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    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}