{ "type": "genome", "identifier": "GCA_902784795.1", "organism": "uncultured Sutterellaceae bacterium", "title": "uncultured Sutterellaceae bacterium", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "THE ROSLIN INSTITUTE", "publication": [ {} ], "properties": { "assembly_accession": "GCA_902784795.1", "bioproject": "PRJEB31266", "biosample": "SAMEA6151147", "wgs_master": "CACZWI000000000.1", "refseq_category": "na", "taxid": "1229253", "species_taxid": "1229253", "organism_name": "uncultured Sutterellaceae bacterium", "infraspecific_name": "", "isolate": "RUG13011", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/02/15", "asm_name": "Rumen uncultured genome RUG13011", "submitter": "THE ROSLIN INSTITUTE", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/902/784/795/GCA_902784795.1_Rumen_uncultured_genome_RUG13011", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-02-15", "dateModified": "2020-02-15", "datePublished": "2020-02-15", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Sutterellaceae bacterium" ], "sample_taxid": [ "1229253" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "United Kingdom" ], "sample_host_location_id": [], "data_size": "0.576 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 8.33, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2040531", "Number of Sequences": "220", "Longest Sequences (bp)": "47637", "N50 (bp)": "13507", "Gap Ratio (%)": "0.018035", "GCcontent (%)": "60.4", "Number of CDSs": "1697", "Average Protein Length": "316.1", "Coding Ratio (%)": "78.9", "Number of rRNAs": "0", "Number of tRNAs": "45", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Duodenibacillus massiliensis", "strain": "strain=Marseille-P2968", "accession": "GCA_900128485.1", "taxid": 1852381, "species_taxid": 1852381, "relation_to_type": "type", "validated": true, "ani": 78.1866, "matched_fragments": 124, "total_fragments": 571, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sutterella faecalis", "strain": "strain=KGMB03119", "accession": "GCA_006337085.1", "taxid": 2584944, "species_taxid": 2584944, "relation_to_type": "type", "validated": true, "ani": 77.7279, "matched_fragments": 99, "total_fragments": 571, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sutterella megalosphaeroides", "strain": "strain=6FBBBH3", "accession": "GCA_003609995.1", "taxid": 2494234, "species_taxid": 2494234, "relation_to_type": "type", "validated": true, "ani": 77.2936, "matched_fragments": 99, "total_fragments": 571, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sutterella wadsworthensis", "strain": "strain=FDAARGOS_1159", "accession": "GCA_016724805.1", "taxid": 40545, "species_taxid": 40545, "relation_to_type": "type", "validated": true, "ani": 77.0746, "matched_fragments": 51, "total_fragments": 571, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sutterella wadsworthensis", "strain": "strain=DSM 14016", "accession": "GCA_003315195.1", "taxid": 40545, "species_taxid": 40545, "relation_to_type": "type", "validated": true, "ani": 77.0365, "matched_fragments": 50, "total_fragments": 571, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ramlibacter aquaticus", "strain": "strain=LMG 30558", "accession": "GCA_015159745.1", "taxid": 2780094, "species_taxid": 2780094, "relation_to_type": "type", "validated": true, "ani": 76.7588, "matched_fragments": 57, "total_fragments": 571, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Castellaniella defragrans", "strain": "strain=CCUG 39790", "accession": "GCA_008801975.1", "taxid": 75697, "species_taxid": 75697, "relation_to_type": "type", "validated": true, "ani": 76.6454, "matched_fragments": 56, "total_fragments": 571, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera chlorobenzoica", "strain": "strain=3CB1", "accession": "GCA_001922305.1", "taxid": 96773, "species_taxid": 96773, "relation_to_type": "type", "validated": true, "ani": 76.5738, "matched_fragments": 50, "total_fragments": 571, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ramlibacter algicola", "strain": "strain=CrO1", "accession": "GCA_016641735.1", "taxid": 2795217, "species_taxid": 2795217, "relation_to_type": "type", "validated": true, "ani": 76.5397, "matched_fragments": 57, "total_fragments": 571, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Castellaniella defragrans", "strain": "strain=DSM 12141", "accession": "GCA_014203015.1", "taxid": 75697, "species_taxid": 75697, "relation_to_type": "type", "validated": true, "ani": 76.5362, "matched_fragments": 59, "total_fragments": 571, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera chlorobenzoica", "strain": "strain=3CB-1", "accession": "GCA_900108255.1", "taxid": 96773, "species_taxid": 96773, "relation_to_type": "type", "validated": true, "ani": 76.5346, "matched_fragments": 50, "total_fragments": 571, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Achromobacter ruhlandii", "strain": "strain=LMG 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