{
    "type": "genome",
    "identifier": "GCA_902795465.1",
    "organism": "uncultured proteobacterium",
    "title": "uncultured proteobacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "THE ROSLIN INSTITUTE",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_902795465.1",
        "bioproject": "PRJEB31266",
        "biosample": "SAMEA6152211",
        "wgs_master": "CADBLH000000000.1",
        "refseq_category": "na",
        "taxid": "153809",
        "species_taxid": "153809",
        "organism_name": "uncultured proteobacterium",
        "infraspecific_name": "",
        "isolate": "RUG14073",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/02/14",
        "asm_name": "Rumen uncultured genome RUG14073",
        "submitter": "THE ROSLIN INSTITUTE",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/902/795/465/GCA_902795465.1_Rumen_uncultured_genome_RUG14073",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-02-14",
    "dateModified": "2020-02-14",
    "datePublished": "2020-02-14",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured proteobacterium"
        ],
        "sample_taxid": [
            "153809"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "United Kingdom"
        ],
        "sample_host_location_id": [],
        "data_size": "0.248 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "892888",
        "Number of Sequences": "14",
        "Longest Sequences (bp)": "281617",
        "N50 (bp)": "183802",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "42.0",
        "Number of CDSs": "857",
        "Average Protein Length": "303.7",
        "Coding Ratio (%)": "87.4",
        "Number of rRNAs": "0",
        "Number of tRNAs": "43",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
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                "accession": "GCA_902793005.1",
                "gtdb_species": "s__Enterousia sp902793005",
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                "matched_fragments": 249,
                "total_fragments": 291,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rs-D84;f__Rs-D84;g__Enterousia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.34",
                "min_intra_species_ani": "97.05",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 4,
                "status": "conclusive"
            },
            {
                "accession": "GCA_002373935.1",
                "gtdb_species": "s__Enterousia sp002373935",
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                "matched_fragments": 236,
                "total_fragments": 291,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rs-D84;f__Rs-D84;g__Enterousia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902788485.1",
                "gtdb_species": "s__Enterousia sp902788485",
                "ani": 85.7319,
                "matched_fragments": 234,
                "total_fragments": 291,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rs-D84;f__Rs-D84;g__Enterousia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.89",
                "min_intra_species_ani": "96.89",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_002371155.1",
                "gtdb_species": "s__Enterousia sp002371155",
                "ani": 82.2776,
                "matched_fragments": 209,
                "total_fragments": 291,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rs-D84;f__Rs-D84;g__Enterousia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.45",
                "min_intra_species_ani": "95.45",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_018064365.1",
                "gtdb_species": "s__Enterousia sp018064365",
                "ani": 81.9564,
                "matched_fragments": 201,
                "total_fragments": 291,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rs-D84;f__Rs-D84;g__Enterousia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902802115.1",
                "gtdb_species": "s__Enterousia sp902802115",
                "ani": 81.5856,
                "matched_fragments": 199,
                "total_fragments": 291,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rs-D84;f__Rs-D84;g__Enterousia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.53",
                "min_intra_species_ani": "96.53",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.93",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_902799285.1",
                "gtdb_species": "s__Enterousia sp902799285",
                "ani": 81.3206,
                "matched_fragments": 181,
                "total_fragments": 291,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rs-D84;f__Rs-D84;g__Enterousia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902793435.1",
                "gtdb_species": "s__Enterousia sp902793435",
                "ani": 81.1984,
                "matched_fragments": 195,
                "total_fragments": 291,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rs-D84;f__Rs-D84;g__Enterousia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017534945.1",
                "gtdb_species": "s__Enterousia sp017534945",
                "ani": 81.0877,
                "matched_fragments": 175,
                "total_fragments": 291,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rs-D84;f__Rs-D84;g__Enterousia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902774305.1",
                "gtdb_species": "s__Enterousia sp902774305",
                "ani": 79.6939,
                "matched_fragments": 161,
                "total_fragments": 291,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rs-D84;f__Rs-D84;g__Enterousia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017472065.1",
                "gtdb_species": "s__Enterousia sp017472065",
                "ani": 77.0632,
                "matched_fragments": 75,
                "total_fragments": 291,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rs-D84;f__Rs-D84;g__Enterousia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Alphaproteobacteria",
        "o__Rs-D84",
        "f__Rs-D84",
        "g__Enterousia",
        "s__Enterousia sp902793005"
    ],
    "_genome_taxon": [
        "uncultured",
        "proteobacterium",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Alphaproteobacteria",
        "o__Rs-D84",
        "f__Rs-D84",
        "g__Enterousia",
        "s__Enterousia sp902793005",
        "Bacteria",
        "Pseudomonadota",
        "Alphaproteobacteria",
        "Rs-D84",
        "Rs-D84",
        "Enterousia",
        "Enterousia",
        "sp902793005"
    ],
    "_meo": [
        {
            "id": "MEO_0000046",
            "label": "rumen"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}