{ "type": "genome", "identifier": "GCA_902795825.1", "organism": "uncultured Bacteroidales bacterium", "title": "uncultured Bacteroidales bacterium", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "THE ROSLIN INSTITUTE", "publication": [ {} ], "properties": { "assembly_accession": "GCA_902795825.1", "bioproject": "PRJEB31266", "biosample": "SAMEA6152244", "wgs_master": "CADBML000000000.1", "refseq_category": "na", "taxid": "194843", "species_taxid": "194843", "organism_name": "uncultured Bacteroidales bacterium", "infraspecific_name": "", "isolate": "RUG14106", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/02/15", "asm_name": "Rumen uncultured genome RUG14106", "submitter": "THE ROSLIN INSTITUTE", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/902/795/825/GCA_902795825.1_Rumen_uncultured_genome_RUG14106", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-02-15", "dateModified": "2020-02-15", "datePublished": "2020-02-15", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Bacteroidales bacterium" ], "sample_taxid": [ "194843" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "United Kingdom" ], "sample_host_location_id": [], "data_size": "0.614 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2152211", "Number of Sequences": "220", "Longest Sequences (bp)": "38815", "N50 (bp)": "14116", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "51.3", "Number of CDSs": "1595", "Average Protein Length": "358.2", "Coding Ratio (%)": "79.6", "Number of rRNAs": "0", "Number of tRNAs": "46", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_902795825.1", "gtdb_species": "s__RUG14106 sp902795825", "ani": 100.0, "matched_fragments": 593, "total_fragments": 599, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__RUG14106", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.53", "min_intra_species_ani": "98.19", "mean_intra_species_af": "0.84", "min_intra_species_af": "0.79", 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