{ "type": "genome", "identifier": "GCA_902797175.1", "organism": "uncultured Coriobacteriaceae bacterium", "title": "uncultured Coriobacteriaceae bacterium", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "THE ROSLIN INSTITUTE", "publication": [ {} ], "properties": { "assembly_accession": "GCA_902797175.1", "bioproject": "PRJEB31266", "biosample": "SAMEA6152383", "wgs_master": "CADBRX000000000.1", "refseq_category": "na", "taxid": "331632", "species_taxid": "331632", "organism_name": "uncultured Coriobacteriaceae bacterium", "infraspecific_name": "", "isolate": "RUG14245", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/02/15", "asm_name": "Rumen uncultured genome RUG14245", "submitter": "THE ROSLIN INSTITUTE", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/902/797/175/GCA_902797175.1_Rumen_uncultured_genome_RUG14245", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-02-15", "dateModified": "2020-02-15", "datePublished": "2020-02-15", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Coriobacteriaceae bacterium" ], "sample_taxid": [ "331632" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "United Kingdom" ], "sample_host_location_id": [], "data_size": "0.634 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 59.38, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2252692", "Number of Sequences": "194", "Longest Sequences (bp)": "51060", "N50 (bp)": "20177", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "62.9", "Number of CDSs": "1921", "Average Protein Length": "320.9", "Coding Ratio (%)": "82.1", "Number of rRNAs": "0", "Number of tRNAs": "31", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Olsenella intestinalis", "strain": "strain=KCTC 25379", "accession": "GCA_023276655.1", "taxid": 2930083, "species_taxid": 2930083, "relation_to_type": "type", "validated": true, "ani": 78.7743, "matched_fragments": 192, "total_fragments": 655, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thermophilibacter provencensis", "strain": "strain=Marseille-P2912", "accession": "GCA_900128445.1", "taxid": 1852386, "species_taxid": 1852386, "relation_to_type": "type", "validated": true, "ani": 78.4753, "matched_fragments": 191, "total_fragments": 655, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Olsenella phocaeensis", "strain": "strain=Marseille-P2936", "accession": "GCA_900120385.1", "taxid": 1852385, "species_taxid": 1852385, "relation_to_type": "type", "validated": true, "ani": 78.4308, "matched_fragments": 161, "total_fragments": 655, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thermophilibacter mediterraneus", "strain": "strain=Marseille-P3256", "accession": "GCA_900119385.1", "taxid": 1871031, "species_taxid": 1871031, "relation_to_type": "type", "validated": true, "ani": 78.1611, "matched_fragments": 188, "total_fragments": 655, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Olsenella uli", "strain": "strain=DSM 7084", "accession": "GCA_000143845.1", "taxid": 133926, "species_taxid": 133926, "relation_to_type": "suspected-type", "validated": true, "ani": 77.998, "matched_fragments": 140, "total_fragments": 655, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Olsenella uli", "strain": "strain=DSM 7084", "accession": "GCA_001437585.1", "taxid": 133926, "species_taxid": 133926, "relation_to_type": "suspected-type", "validated": true, "ani": 77.9955, "matched_fragments": 144, "total_fragments": 655, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Olsenella urininfantis", "strain": "strain=Marseille-P3197", "accession": "GCA_900155635.1", "taxid": 1871033, "species_taxid": 1871033, "relation_to_type": "type", "validated": true, "ani": 77.9295, "matched_fragments": 141, "total_fragments": 655, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Olsenella massiliensis", "strain": "strain=SIT9", "accession": "GCA_001457795.1", "taxid": 1622075, "species_taxid": 1622075, "relation_to_type": "type", "validated": true, "ani": 77.6314, "matched_fragments": 147, "total_fragments": 655, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enorma timonensis", "strain": "strain=GD5", "accession": "GCA_000321165.1", "taxid": 1232436, "species_taxid": 1232436, "relation_to_type": "type", "validated": true, "ani": 77.2779, "matched_fragments": 105, "total_fragments": 655, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Collinsella vaginalis", "strain": "strain=Marseille-P2666", "accession": "GCA_900176655.1", "taxid": 1870987, "species_taxid": 1870987, "relation_to_type": "type", "validated": true, "ani": 76.7224, "matched_fragments": 70, "total_fragments": 655, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gordonibacter urolithinfaciens", "strain": "strain=DSM 27213", "accession": "GCA_003788975.1", "taxid": 1335613, "species_taxid": 1335613, "relation_to_type": "type", "validated": true, "ani": 76.2652, "matched_fragments": 55, "total_fragments": 655, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { 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