{ "type": "genome", "identifier": "GCA_902805495.1", "organism": "uncultured Actinomycetospora sp.", "title": "uncultured Actinomycetospora sp.", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "UNIVERSITY OF VIENNA", "publication": [ {} ], "properties": { "assembly_accession": "GCA_902805495.1", "bioproject": "PRJEB36534", "biosample": "SAMEA6526636", "wgs_master": "CADCTH000000000.1", "refseq_category": "na", "taxid": "1135996", "species_taxid": "1135996", "organism_name": "uncultured Actinomycetospora sp.", "infraspecific_name": "", "isolate": "AVDCRST_MAG54", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/06/30", "asm_name": "AVDCRST-MAG54", "submitter": "UNIVERSITY OF VIENNA", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/902/805/495/GCA_902805495.1_AVDCRST-MAG54", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-06-30", "dateModified": "2020-06-30", "datePublished": "2020-06-30", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Actinomycetospora sp." ], "sample_taxid": [ "1135996" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Israel" ], "sample_host_location_id": [], "data_size": "1.126 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 79.17, "contamination": 4.17, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "4303306", "Number of Sequences": "638", "Longest Sequences (bp)": "47572", "N50 (bp)": "8399", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "74.6", "Number of CDSs": "3881", "Average Protein Length": "279.8", "Coding Ratio (%)": "75.7", "Number of rRNAs": "0", "Number of tRNAs": "47", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Actinomycetospora cinnamomea", "strain": "strain=DSM 45771", "accession": "GCA_003096675.1", "taxid": 663609, "species_taxid": 663609, "relation_to_type": "type", "validated": true, "ani": 87.3879, "matched_fragments": 965, "total_fragments": 1123, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomycetospora succinea", "strain": "strain=DSM 45775", "accession": "GCA_004363095.1", "taxid": 663603, "species_taxid": 663603, "relation_to_type": "type", "validated": true, "ani": 86.0106, "matched_fragments": 964, "total_fragments": 1123, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomycetospora soli", "strain": "strain=SF1", "accession": "GCA_021026295.1", "taxid": 2893887, "species_taxid": 2893887, "relation_to_type": "type", "validated": true, "ani": 81.4798, "matched_fragments": 778, "total_fragments": 1123, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomycetospora corticicola", "strain": "strain=DSM 45772", "accession": "GCA_013409505.1", "taxid": 663602, "species_taxid": 663602, "relation_to_type": "type", "validated": true, "ani": 81.2133, "matched_fragments": 759, "total_fragments": 1123, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomycetospora chiangmaiensis", "strain": "strain=DSM 45062", "accession": "GCA_000379625.1", "taxid": 402650, "species_taxid": 402650, "relation_to_type": "type", "validated": true, "ani": 81.1867, "matched_fragments": 762, "total_fragments": 1123, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomycetospora endophytica", "strain": "strain=TBRC 5722", "accession": "GCA_021026375.1", "taxid": 2291215, "species_taxid": 2291215, "relation_to_type": "type", "validated": true, "ani": 81.1593, "matched_fragments": 775, "total_fragments": 1123, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudonocardia hydrocarbonoxydans", "strain": "strain=NBRC 14498", "accession": "GCA_006539565.1", "taxid": 76726, "species_taxid": 76726, "relation_to_type": "type", "validated": true, "ani": 78.2403, "matched_fragments": 578, "total_fragments": 1123, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Geodermatophilus obscurus", "strain": "strain=DSM 43160", "accession": "GCA_000025345.1", "taxid": 1861, "species_taxid": 1861, "relation_to_type": "type", "validated": true, "ani": 76.9905, "matched_fragments": 453, "total_fragments": 1123, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lentzea guizhouensis", "strain": "strain=DHS C013", "accession": "GCA_001701025.1", "taxid": 1586287, "species_taxid": 1586287, "relation_to_type": "type", "validated": true, "ani": 76.9856, "matched_fragments": 478, "total_fragments": 1123, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Amycolatopsis australiensis", "strain": "strain=DSM 44671", "accession": "GCA_900119165.1", "taxid": 546364, "species_taxid": 546364, "relation_to_type": "type", "validated": true, "ani": 76.9763, "matched_fragments": 531, "total_fragments": 1123, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Geodermatophilus pulveris", "strain": "strain=DSM 46839", "accession": "GCA_900188375.1", "taxid": 1564159, "species_taxid": 1564159, "relation_to_type": "type", "validated": true, "ani": 76.9139, "matched_fragments": 444, "total_fragments": 1123, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Motilibacter peucedani", "strain": "strain=RP-AC37", "accession": "GCA_003634695.1", "taxid": 598650, "species_taxid": 598650, "relation_to_type": "type", "validated": true, "ani": 76.5461, "matched_fragments": 379, "total_fragments": 1123, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Motilibacter deserti", "strain": "strain=E257", "accession": "GCA_011250635.1", "taxid": 2714956, "species_taxid": 2714956, "relation_to_type": "type", "validated": true, "ani": 76.4825, "matched_fragments": 346, "total_fragments": 1123, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Motilibacter rhizosphaerae", "strain": "strain=DSM 45622", "accession": "GCA_004216915.1", "taxid": 598652, "species_taxid": 598652, "relation_to_type": "type", "validated": true, "ani": 76.4361, "matched_fragments": 397, "total_fragments": 1123, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Motilibacter aurantiacus", "strain": "strain=K478", "accession": "GCA_011250645.1", 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