{ "type": "genome", "identifier": "GCA_902805675.1", "organism": "uncultured Chthoniobacterales bacterium", "title": "uncultured Chthoniobacterales bacterium", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "UNIVERSITY OF VIENNA", "publication": [ {} ], "properties": { "assembly_accession": "GCA_902805675.1", "bioproject": "PRJEB36534", "biosample": "SAMEA6526624", "wgs_master": "CADCTA000000000.1", "refseq_category": "na", "taxid": "1836801", "species_taxid": "1836801", "organism_name": "uncultured Chthoniobacterales bacterium", "infraspecific_name": "", "isolate": "AVDCRST_MAG42", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/06/30", "asm_name": "AVDCRST-MAG42", "submitter": "UNIVERSITY OF VIENNA", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/902/805/675/GCA_902805675.1_AVDCRST-MAG42", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-06-30", "dateModified": "2020-06-30", "datePublished": "2020-06-30", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Chthoniobacterales bacterium" ], "sample_taxid": [ "1836801" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Israel" ], "sample_host_location_id": [], "data_size": "0.989 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 91.29, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "3525173", "Number of Sequences": "125", "Longest Sequences (bp)": "122300", "N50 (bp)": "44622", "Gap Ratio (%)": "0.000851", "GCcontent (%)": "63.0", "Number of CDSs": "2957", "Average Protein Length": "336.5", "Coding Ratio (%)": "84.7", "Number of rRNAs": "2", "Number of tRNAs": "44", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Terrimicrobium sacchariphilum", "strain": "strain=NM-5", "accession": "GCA_001613545.1", "taxid": 690879, "species_taxid": 690879, "relation_to_type": "type", "validated": true, "ani": 76.5977, "matched_fragments": 51, "total_fragments": 1107, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chthoniobacter flavus", "strain": "strain=Ellin428", "accession": "GCA_000173075.1", "taxid": 191863, "species_taxid": 191863, "relation_to_type": "type", "validated": true, "ani": 76.1578, "matched_fragments": 85, "total_fragments": 1107, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chthoniobacter flavus", "strain": "strain=DSM 22515", "accession": "GCA_004341915.1", "taxid": 191863, "species_taxid": 191863, "relation_to_type": "type", "validated": true, "ani": 76.1195, "matched_fragments": 85, "total_fragments": 1107, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bradyrhizobium diazoefficiens", "strain": "strain=USDA 110", "accession": "GCA_001642675.1", "taxid": 1355477, "species_taxid": 1355477, "relation_to_type": "type", "validated": true, "ani": 75.0639, "matched_fragments": 51, "total_fragments": 1107, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bradyrhizobium diazoefficiens", "strain": "strain=USDA110", "accession": "GCA_000011365.1", "taxid": 1355477, "species_taxid": 1355477, "relation_to_type": "type", "validated": true, "ani": 75.0639, "matched_fragments": 51, "total_fragments": 1107, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Frankia saprophytica", "strain": "strain=CN3", "accession": "GCA_000235425.3", "taxid": 298655, "species_taxid": 298655, "relation_to_type": "type", "validated": true, "ani": 74.8442, "matched_fragments": 53, "total_fragments": 1107, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium indicum", "strain": "strain=SE2.11", "accession": "GCA_001043895.1", "taxid": 1775910, "species_taxid": 1775910, "relation_to_type": "type", "validated": true, "ani": 74.6896, "matched_fragments": 52, "total_fragments": 1107, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinoplanes lichenicola", "strain": "strain=LDG1-01", "accession": "GCA_016785085.1", "taxid": 2802976, "species_taxid": 2802976, "relation_to_type": "type", "validated": true, "ani": 74.6041, "matched_fragments": 56, "total_fragments": 1107, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { 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