{ "type": "genome", "identifier": "GCA_902826065.1", "organism": "uncultured Acidobacteriota bacterium", "title": "uncultured Acidobacteriota bacterium", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "UNIVERSITY OF WATERLOO", "publication": [ {} ], "properties": { "assembly_accession": "GCA_902826065.1", "bioproject": "PRJEB30654", "biosample": "SAMEA6595186", "wgs_master": "CADEDM000000000.1", "refseq_category": "na", "taxid": "171953", "species_taxid": "171953", "organism_name": "uncultured Acidobacteriota bacterium", "infraspecific_name": "", "isolate": "Acidobacteria sp. RBC084", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/04/15", "asm_name": "RBC084", "submitter": "UNIVERSITY OF WATERLOO", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/902/826/065/GCA_902826065.1_RBC084", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-04-15", "dateModified": "2020-04-15", "datePublished": "2020-04-15", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Acidobacteriota bacterium" ], "sample_taxid": [ "171953" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Canada" ], "sample_host_location_id": [], "data_size": "1.517 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 85.04, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "5645155", "Number of Sequences": "416", "Longest Sequences (bp)": "111425", "N50 (bp)": "23034", "Gap Ratio (%)": "0.052434", "GCcontent (%)": "70.8", "Number of CDSs": "4487", "Average Protein Length": "350.8", "Coding Ratio (%)": "83.6", "Number of rRNAs": "0", "Number of tRNAs": "44", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Luteitalea pratensis", "strain": "strain=DSM 100886; HEG_-6_39", "accession": "GCA_001618865.1", "taxid": 1855912, "species_taxid": 1855912, "relation_to_type": "type", "validated": true, "ani": 76.2601, "matched_fragments": 319, "total_fragments": 1667, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Luteimonas terricola", "strain": "strain=BZ92r", "accession": "GCA_004352845.1", "taxid": 645597, "species_taxid": 645597, "relation_to_type": "type", "validated": true, "ani": 75.0659, "matched_fragments": 148, "total_fragments": 1667, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Luteimonas terricola", "strain": "strain=CGMCC 1.8985", "accession": "GCA_014645675.1", "taxid": 645597, "species_taxid": 645597, "relation_to_type": "type", "validated": true, "ani": 75.0554, "matched_fragments": 151, "total_fragments": 1667, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corallococcus silvisoli", "strain": "strain=c25j21", "accession": "GCA_009909145.1", "taxid": 2697031, "species_taxid": 2697031, "relation_to_type": "type", "validated": true, "ani": 75.0478, "matched_fragments": 181, "total_fragments": 1667, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stenotrophomonas 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"GCA_022662575.1", "taxid": 450364, "species_taxid": 450364, "relation_to_type": "type", "validated": true, "ani": 74.9575, "matched_fragments": 219, "total_fragments": 1667, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoxanthomonas composti", "strain": "strain=GSS15", "accession": "GCA_004122095.1", "taxid": 2137479, "species_taxid": 2137479, "relation_to_type": "type", "validated": true, "ani": 74.9557, "matched_fragments": 131, "total_fragments": 1667, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corallococcus soli", "strain": "strain=ZKHCc1 1396", "accession": "GCA_014930455.1", "taxid": 2710757, "species_taxid": 2710757, "relation_to_type": "type", "validated": true, "ani": 74.9533, "matched_fragments": 180, "total_fragments": 1667, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium telephonicum", "strain": "strain=S2T63", "accession": "GCA_003651225.1", "taxid": 1714841, "species_taxid": 1714841, "relation_to_type": "type", "validated": true, "ani": 74.949, "matched_fragments": 155, "total_fragments": 1667, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudofulvimonas gallinarii", "strain": "strain=DSM 21944", "accession": "GCA_004798975.1", "taxid": 634155, "species_taxid": 634155, "relation_to_type": "type", "validated": true, "ani": 74.9433, "matched_fragments": 104, "total_fragments": 1667, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodanobacter denitrificans", "strain": "strain=2APBS1", "accession": "GCA_000230695.3", "taxid": 666685, "species_taxid": 666685, "relation_to_type": "type", "validated": true, "ani": 74.9305, "matched_fragments": 143, "total_fragments": 1667, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Xanthobacter tagetidis", "strain": "strain=ATCC 700314", "accession": "GCA_003667445.1", "taxid": 60216, "species_taxid": 60216, "relation_to_type": "type", "validated": true, "ani": 74.896, "matched_fragments": 173, "total_fragments": 1667, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Xanthobacter tagetidis", "strain": "strain=DSM 11105", "accession": "GCA_014206845.1", "taxid": 60216, "species_taxid": 60216, "relation_to_type": "type", "validated": true, "ani": 74.8953, "matched_fragments": 174, "total_fragments": 1667, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinacidiphila alni", "strain": "strain=CGMCC 4.3510", "accession": "GCA_900112845.1", "taxid": 380248, "species_taxid": 380248, "relation_to_type": "type", "validated": true, "ani": 74.8762, "matched_fragments": 245, "total_fragments": 1667, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides marinus", "strain": "strain=DSM 18248", "accession": "GCA_013408145.1", "taxid": 374514, "species_taxid": 374514, "relation_to_type": "type", "validated": true, "ani": 74.8499, "matched_fragments": 187, "total_fragments": 1667, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gordonia hirsuta", "strain": "strain=DSM 44140", "accession": "GCA_000420685.1", "taxid": 53427, "species_taxid": 53427, "relation_to_type": "type", "validated": true, "ani": 74.8278, "matched_fragments": 85, "total_fragments": 1667, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gordonia hirsuta", "strain": "strain=NBRC 16056", "accession": "GCA_000333015.1", "taxid": 53427, "species_taxid": 53427, "relation_to_type": "type", "validated": true, "ani": 74.8278, "matched_fragments": 85, "total_fragments": 1667, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces rhizosphaericola", "strain": "strain=1AS2c", "accession": "GCA_004794175.1", "taxid": 2564098, "species_taxid": 2564098, "relation_to_type": "type", "validated": true, "ani": 74.8178, "matched_fragments": 149, "total_fragments": 1667, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agrococcus jejuensis", "strain": "strain=DSM 22002", "accession": "GCA_900099705.1", "taxid": 399736, "species_taxid": 399736, "relation_to_type": "type", "validated": true, "ani": 74.8155, "matched_fragments": 248, "total_fragments": 1667, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Saccharothrix espanaensis", "strain": "strain=type strain: DSM 44229", "accession": "GCA_000328705.1", "taxid": 103731, "species_taxid": 103731, "relation_to_type": "type", "validated": true, "ani": 74.8104, "matched_fragments": 285, "total_fragments": 1667, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agrococcus jenensis", "strain": "strain=DSM 9580", "accession": "GCA_003752465.1", "taxid": 46353, "species_taxid": 46353, "relation_to_type": "type", "validated": true, "ani": 74.804, "matched_fragments": 182, "total_fragments": 1667, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mucisphaera calidilacus", "strain": "strain=Pan265", "accession": "GCA_007748075.1", "taxid": 2527982, "species_taxid": 2527982, "relation_to_type": "type", "validated": true, "ani": 74.7929, "matched_fragments": 50, "total_fragments": 1667, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gordonia hankookensis", "strain": "strain=ON-33", "accession": "GCA_014673215.1", "taxid": 589403, "species_taxid": 589403, "relation_to_type": "type", "validated": true, "ani": 74.7891, "matched_fragments": 94, "total_fragments": 1667, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phreatobacter stygius", "strain": "strain=KCTC 52518", "accession": "GCA_005144885.1", "taxid": 1940610, "species_taxid": 1940610, "relation_to_type": "type", "validated": true, "ani": 74.7646, "matched_fragments": 191, "total_fragments": 1667, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Kocuria palustris", "strain": 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