{ "tc_result": [ { "organism_name": "Amphiplicatus metriothermophilus", "strain": "strain=DSM 105738", "accession": "GCA_014199495.1", "taxid": 1519374, "species_taxid": 1519374, "relation_to_type": "type", "validated": true, "ani": 77.3204, "matched_fragments": 342, "total_fragments": 1236, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Amphiplicatus metriothermophilus", "strain": "strain=CGMCC 1.12710", "accession": "GCA_900199215.1", "taxid": 1519374, "species_taxid": 1519374, "relation_to_type": "type", "validated": true, "ani": 77.3033, "matched_fragments": 344, "total_fragments": 1236, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marinicaulis flavus", "strain": "strain=SY-3-19", "accession": "GCA_002943565.1", "taxid": 2058213, "species_taxid": 2058213, "relation_to_type": "type", "validated": true, "ani": 77.2131, "matched_fragments": 336, "total_fragments": 1236, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquisalinus luteolus", "strain": "strain=NH6-79", "accession": "GCA_009712425.2", "taxid": 1566827, "species_taxid": 1566827, "relation_to_type": "type", "validated": true, "ani": 76.6947, "matched_fragments": 103, "total_fragments": 1236, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquisalinus luteolus", "strain": "strain=CGMCC 1.14984", "accession": "GCA_014640455.1", "taxid": 1566827, "species_taxid": 1566827, "relation_to_type": "type", "validated": true, "ani": 76.6524, "matched_fragments": 105, "total_fragments": 1236, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquisalinus flavus", "strain": "strain=CGMCC 1.12921", "accession": "GCA_014640095.1", "taxid": 1526572, "species_taxid": 1526572, "relation_to_type": "type", "validated": true, "ani": 76.5624, "matched_fragments": 131, "total_fragments": 1236, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquisalinus flavus", "strain": "strain=D11M-2", "accession": "GCA_014534785.1", "taxid": 1526572, "species_taxid": 1526572, "relation_to_type": "type", "validated": true, "ani": 76.5461, "matched_fragments": 132, "total_fragments": 1236, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquisalinus flavus", "strain": "strain=D11M-2", "accession": "GCA_022559625.1", "taxid": 1526572, "species_taxid": 1526572, "relation_to_type": "type", "validated": true, "ani": 76.479, "matched_fragments": 129, "total_fragments": 1236, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Parvularcula oceani", "strain": "strain=JLT2013", "accession": "GCA_000733125.1", "taxid": 1247963, "species_taxid": 1247963, "relation_to_type": "type", "validated": true, "ani": 76.3814, "matched_fragments": 151, "total_fragments": 1236, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nisaea acidiphila", "strain": "strain=MEBiC11861", "accession": "GCA_024662015.1", "taxid": 1862145, "species_taxid": 1862145, "relation_to_type": "type", "validated": true, "ani": 76.3082, "matched_fragments": 81, "total_fragments": 1236, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Parvularcula marina", "strain": "strain=SM1705", "accession": "GCA_003399445.1", "taxid": 2292771, "species_taxid": 2292771, "relation_to_type": "type", "validated": true, "ani": 76.0073, "matched_fragments": 82, "total_fragments": 1236, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nitratireductor alexandrii", "strain": "strain=Z3-1", "accession": "GCA_004000215.1", "taxid": 2448161, "species_taxid": 2448161, "relation_to_type": "type", "validated": true, "ani": 76.0013, "matched_fragments": 141, "total_fragments": 1236, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marinicauda salina", "strain": "strain=WD6-1", "accession": "GCA_003122085.1", "taxid": 2135793, "species_taxid": 2135793, "relation_to_type": "type", "validated": true, "ani": 75.9964, "matched_fragments": 153, "total_fragments": 1236, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodobium orientis", "strain": "strain=DSM 11290", "accession": "GCA_003258835.1", "taxid": 34017, "species_taxid": 34017, "relation_to_type": "type", "validated": true, "ani": 75.9843, "matched_fragments": 126, "total_fragments": 1236, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodobium orientis", "strain": "strain=DSM 11290", "accession": "GCA_014197785.1", "taxid": 34017, "species_taxid": 34017, "relation_to_type": "type", "validated": true, "ani": 75.9784, "matched_fragments": 128, "total_fragments": 1236, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodobium orientis", "strain": "strain=DSM 11290", "accession": "GCA_016653375.1", "taxid": 34017, "species_taxid": 34017, "relation_to_type": "type", "validated": true, "ani": 75.96, "matched_fragments": 128, "total_fragments": 1236, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bradyrhizobium nitroreducens", "strain": "strain=TSA1", "accession": "GCA_002776695.1", "taxid": 709803, "species_taxid": 709803, "relation_to_type": "type", "validated": true, "ani": 75.8559, "matched_fragments": 151, "total_fragments": 1236, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhizobium ruizarguesonis", "strain": "strain=UPM1133", "accession": "GCA_012349115.1", "taxid": 2081791, "species_taxid": 2081791, "relation_to_type": "type", "validated": true, "ani": 75.7029, "matched_fragments": 104, "total_fragments": 1236, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Reyranella aquatilis", "strain": "strain=KCTC 52223", "accession": "GCA_020880995.1", "taxid": 2035356, "species_taxid": 2035356, "relation_to_type": "type", "validated": true, "ani": 75.6342, "matched_fragments": 106, "total_fragments": 1236, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oharaeibacter diazotrophicus", "strain": "strain=SM30", "accession": "GCA_011317485.1", "taxid": 1920512, "species_taxid": 1920512, "relation_to_type": "type", "validated": true, "ani": 75.5561, "matched_fragments": 158, "total_fragments": 1236, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oharaeibacter diazotrophicus", "strain": "strain=DSM 102969", "accession": "GCA_004362745.1", "taxid": 1920512, "species_taxid": 1920512, "relation_to_type": "type", "validated": true, "ani": 75.3848, "matched_fragments": 193, "total_fragments": 1236, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseococcus pinisoli", "strain": "strain=XZZS9", "accession": "GCA_018413645.1", "taxid": 2835040, "species_taxid": 2835040, "relation_to_type": "type", "validated": true, "ani": 75.382, "matched_fragments": 96, "total_fragments": 1236, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_902826095.1", "gtdb_species": "s__CV81 sp902826095", "ani": 100.0, "matched_fragments": 1235, "total_fragments": 1236, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Parvularculaceae;g__CV81", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCA_001767925.1", "gtdb_species": "s__CV81 sp001767925", "ani": 80.4649, "matched_fragments": 580, "total_fragments": 1236, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Parvularculaceae;g__CV81", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_013389125.1", "gtdb_species": "s__CV81 sp013389125", "ani": 80.4169, "matched_fragments": 510, "total_fragments": 1236, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Parvularculaceae;g__CV81", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_003506635.1", "gtdb_species": "s__CV81 sp003506635", "ani": 79.0335, "matched_fragments": 419, "total_fragments": 1236, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Parvularculaceae;g__CV81", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_013389105.1", "gtdb_species": "s__JACADZ01 sp013389105", "ani": 77.4781, "matched_fragments": 279, "total_fragments": 1236, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Parvularculaceae;g__JACADZ01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900199215.1", "gtdb_species": "s__Amphiplicatus metriothermophilus", "ani": 77.3106, "matched_fragments": 343, "total_fragments": 1236, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Parvularculaceae;g__Amphiplicatus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_002943565.1", "gtdb_species": "s__Marinicaulis flavus", "ani": 77.2019, "matched_fragments": 339, "total_fragments": 1236, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Parvularculaceae;g__Marinicaulis", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016125425.1", "gtdb_species": "s__Amphiplicatus sp016125425", "ani": 77.1919, "matched_fragments": 289, "total_fragments": 1236, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Parvularculaceae;g__Amphiplicatus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002704915.1", "gtdb_species": "s__Marinicaulis sp002704915", "ani": 76.9121, "matched_fragments": 248, "total_fragments": 1236, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Parvularculaceae;g__Marinicaulis", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009712425.2", "gtdb_species": "s__Aquisalinus luteolus", "ani": 76.6947, "matched_fragments": 103, "total_fragments": 1236, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Parvularculaceae;g__Aquisalinus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_001657385.1", "gtdb_species": "s__Marinicaulis sp001657385", "ani": 76.6416, "matched_fragments": 276, "total_fragments": 1236, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Parvularculaceae;g__Marinicaulis", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003015025.1", "gtdb_species": "s__Nitratireductor_D sp003015025", "ani": 75.9285, "matched_fragments": 141, "total_fragments": 1236, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Nitratireductor_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.00", "min_intra_species_ani": "99.00", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.89", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_002088975.1", "gtdb_species": "s__Henriciella aquimarina", "ani": 75.7846, "matched_fragments": 85, "total_fragments": 1236, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Hyphomonadaceae;g__Henriciella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009765995.1", "gtdb_species": "s__Roseiarcus sp009765995", "ani": 75.5838, "matched_fragments": 143, "total_fragments": 1236, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Roseiarcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_019233695.1", "gtdb_species": "s__JAFAME01 sp019233695", "ani": 75.4637, "matched_fragments": 88, "total_fragments": 1236, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__JAFAME01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }