{
    "type": "genome",
    "identifier": "GCA_902835035.1",
    "organism": "Faecalibacterium prausnitzii",
    "title": "Faecalibacterium prausnitzii",
    "description": "derived from metagenome; fragmented assembly; genome length too small",
    "data type": "Genome sequencing and assembly",
    "organization": "EMG",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_902835035.1",
        "bioproject": "PRJEB37358",
        "biosample": "SAMEA6784071",
        "wgs_master": "CADFLG000000000.1",
        "refseq_category": "na",
        "taxid": "853",
        "species_taxid": "853",
        "organism_name": "Faecalibacterium prausnitzii",
        "infraspecific_name": "",
        "isolate": "MGYG-HGUT-04686",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/02/03",
        "asm_name": "MGYG-HGUT-04686",
        "submitter": "EMG",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/902/835/035/GCA_902835035.1_MGYG-HGUT-04686",
        "excluded_from_refseq": "derived from metagenome; fragmented assembly; genome length too small",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-02-03",
    "dateModified": "2021-02-03",
    "datePublished": "2021-02-03",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Faecalibacterium prausnitzii"
        ],
        "sample_taxid": [
            "853"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Netherlands"
        ],
        "sample_host_location_id": [],
        "data_size": "0.382 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 71.99,
        "contamination": 0.76,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1318530",
        "Number of Sequences": "482",
        "Longest Sequences (bp)": "15665",
        "N50 (bp)": "2825",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "59.9",
        "Number of CDSs": "855",
        "Average Protein Length": "269.2",
        "Coding Ratio (%)": "52.4",
        "Number of rRNAs": "0",
        "Number of tRNAs": "20",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Faecalibacterium hattorii",
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                "accession": "GCA_003287455.1",
                "taxid": 2935520,
                "species_taxid": 2935520,
                "relation_to_type": "type",
                "validated": true,
                "ani": 96.2398,
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                "total_fragments": 160,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Faecalibacterium duncaniae",
                "strain": "strain=JCM 31915",
                "accession": "GCA_010509575.1",
                "taxid": 411483,
                "species_taxid": 411483,
                "relation_to_type": "type",
                "validated": true,
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                "total_fragments": 160,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Faecalibacterium duncaniae",
                "strain": "strain=A2-165",
                "accession": "GCA_000162015.1",
                "taxid": 411483,
                "species_taxid": 411483,
                "relation_to_type": "type",
                "validated": true,
                "ani": 86.8469,
                "matched_fragments": 143,
                "total_fragments": 160,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Faecalibacterium prausnitzii",
                "strain": "strain=ATCC 27768",
                "accession": "GCA_003324185.1",
                "taxid": 853,
                "species_taxid": 853,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 86.8036,
                "matched_fragments": 143,
                "total_fragments": 160,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Faecalibacterium gallinarum",
                "strain": "strain=JCM 17207",
                "accession": "GCA_022180365.1",
                "taxid": 2903556,
                "species_taxid": 2903556,
                "relation_to_type": "type",
                "validated": true,
                "ani": 82.4869,
                "matched_fragments": 118,
                "total_fragments": 160,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Subdoligranulum variabile",
                "strain": "strain=DSM 15176",
                "accession": "GCA_025152575.1",
                "taxid": 214851,
                "species_taxid": 214851,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.5669,
                "matched_fragments": 67,
                "total_fragments": 160,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 0.76,
            "strain_heterogeneity": 0.0
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        "gtdb_result": [
            {
                "accession": "GCF_002549975.1",
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                "matched_fragments": 158,
                "total_fragments": 160,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Faecalibacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.03",
                "min_intra_species_ani": "97.77",
                "mean_intra_species_af": "0.90",
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                "num_clustered_genomes": 9,
                "status": "conclusive"
            },
            {
                "accession": "GCA_900758465.1",
                "gtdb_species": "s__Faecalibacterium sp900758465",
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                "total_fragments": 160,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Faecalibacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.14",
                "min_intra_species_ani": "97.85",
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                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCF_002550035.1",
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                "matched_fragments": 147,
                "total_fragments": 160,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Faecalibacterium",
                "ani_circumscription_radius": 95.0,
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                "status": "-"
            },
            {
                "accession": "GCF_003293635.1",
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                "matched_fragments": 146,
                "total_fragments": 160,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Faecalibacterium",
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                "mean_intra_species_ani": "97.11",
                "min_intra_species_ani": "95.97",
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                "num_clustered_genomes": 34,
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            },
            {
                "accession": "GCF_002549755.1",
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                "ani": 88.0085,
                "matched_fragments": 140,
                "total_fragments": 160,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Faecalibacterium",
                "ani_circumscription_radius": 95.0,
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            },
            {
                "accession": "GCA_900539885.1",
                "gtdb_species": "s__Faecalibacterium sp900539885",
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                "matched_fragments": 135,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Faecalibacterium",
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                "min_intra_species_ani": "97.23",
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            {
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                "matched_fragments": 135,
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            {
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                "matched_fragments": 142,
                "total_fragments": 160,
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                "accession": "GCA_900551435.1",
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                "mean_intra_species_ani": "N/A",
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        ]
    },
    "_bac2feature": {
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    "_gtdb_taxon": [
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    "_genome_taxon": [
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        "A",
        "Clostridia",
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        "Faecalibacterium",
        "Faecalibacterium",
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    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}