{
    "type": "genome",
    "identifier": "GCA_902836805.1",
    "organism": "Dialister invisus",
    "title": "Dialister invisus",
    "description": "contaminated; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "EMG",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_902836805.1",
        "bioproject": "PRJEB37358",
        "biosample": "SAMEA6784267",
        "wgs_master": "CADFRW000000000.1",
        "refseq_category": "na",
        "taxid": "218538",
        "species_taxid": "218538",
        "organism_name": "Dialister invisus",
        "infraspecific_name": "",
        "isolate": "MGYG-HGUT-04872",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/02/03",
        "asm_name": "MGYG-HGUT-04872",
        "submitter": "EMG",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/902/836/805/GCA_902836805.1_MGYG-HGUT-04872",
        "excluded_from_refseq": "contaminated; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-02-03",
    "dateModified": "2021-02-03",
    "datePublished": "2021-02-03",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Dialister invisus"
        ],
        "sample_taxid": [
            "218538"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Spain"
        ],
        "sample_host_location_id": [],
        "data_size": "0.745 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 47.22,
        "contamination": 6.77,
        "strain_heterogeneity": 83.33,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2589977",
        "Number of Sequences": "295",
        "Longest Sequences (bp)": "239194",
        "N50 (bp)": "26554",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "38.6",
        "Number of CDSs": "2193",
        "Average Protein Length": "306.2",
        "Coding Ratio (%)": "77.8",
        "Number of rRNAs": "1",
        "Number of tRNAs": "13",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Dialister invisus",
                "strain": "strain=DSM 15470",
                "accession": "GCA_000160055.1",
                "taxid": 218538,
                "species_taxid": 218538,
                "relation_to_type": "type",
                "validated": true,
                "ani": 97.8598,
                "matched_fragments": 99,
                "total_fragments": 704,
                "ani_threshold": 95,
                "status": "inconclusive"
            },
            {
                "organism_name": "Anaerobutyricum hallii",
                "strain": "strain=DSM 3353",
                "accession": "GCA_000173975.1",
                "taxid": 39488,
                "species_taxid": 39488,
                "relation_to_type": "type",
                "validated": true,
                "ani": 96.8231,
                "matched_fragments": 132,
                "total_fragments": 704,
                "ani_threshold": 95,
                "status": "inconclusive"
            }
        ],
        "cc_result": {
            "completeness": 47.22,
            "contamination": 6.77,
            "strain_heterogeneity": 83.33
        },
        "gtdb_result": [
            {
                "accession": "GCF_000160055.1",
                "gtdb_species": "s__Dialister invisus",
                "ani": 97.8598,
                "matched_fragments": 99,
                "total_fragments": 704,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_C;c__Negativicutes;o__Veillonellales;f__Dialisteraceae;g__Dialister",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.75",
                "min_intra_species_ani": "97.05",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.53",
                "num_clustered_genomes": 22,
                "status": "inconclusive"
            },
            {
                "accession": "GCF_000173975.1",
                "gtdb_species": "s__Anaerobutyricum hallii",
                "ani": 96.8231,
                "matched_fragments": 132,
                "total_fragments": 704,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Anaerobutyricum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.51",
                "min_intra_species_ani": "97.99",
                "mean_intra_species_af": "0.84",
                "min_intra_species_af": "0.63",
                "num_clustered_genomes": 21,
                "status": "inconclusive"
            },
            {
                "accession": "GCF_900209925.1",
                "gtdb_species": "s__Anaerobutyricum soehngenii",
                "ani": 84.1366,
                "matched_fragments": 114,
                "total_fragments": 704,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Anaerobutyricum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.18",
                "min_intra_species_ani": "96.91",
                "mean_intra_species_af": "0.82",
                "min_intra_species_af": "0.70",
                "num_clustered_genomes": 12,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.523,
        "cell_length": -0.523,
        "doubling_h": null,
        "growth_tmp": 36.0,
        "optimum_tmp": 37.0,
        "optimum_ph": 7.0,
        "genome_size": 1895860.0,
        "gc_content": 45.5,
        "coding_genes": 1169.0,
        "rRNA16S_genes": 5.0,
        "tRNA_genes": 53.0,
        "gram_stain": 1.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota_C",
        "c__Negativicutes",
        "o__Veillonellales",
        "f__Dialisteraceae",
        "g__Dialister",
        "s__"
    ],
    "_genome_taxon": [
        "Dialister",
        "invisus",
        "d__Bacteria",
        "p__Bacillota_C",
        "c__Negativicutes",
        "o__Veillonellales",
        "f__Dialisteraceae",
        "g__Dialister",
        "s__",
        "Bacteria",
        "Bacillota",
        "C",
        "Negativicutes",
        "Veillonellales",
        "Dialisteraceae",
        "Dialister",
        "s",
        "",
        ""
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}