{
    "type": "genome",
    "identifier": "GCA_902836875.1",
    "organism": "Oscillospiraceae bacterium",
    "title": "Oscillospiraceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "EMG",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_902836875.1",
        "bioproject": "PRJEB37358",
        "biosample": "SAMEA6784281",
        "wgs_master": "CADFSL000000000.1",
        "refseq_category": "na",
        "taxid": "2485925",
        "species_taxid": "2485925",
        "organism_name": "Oscillospiraceae bacterium",
        "infraspecific_name": "",
        "isolate": "MGYG-HGUT-04886",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/02/03",
        "asm_name": "MGYG-HGUT-04886",
        "submitter": "EMG",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/902/836/875/GCA_902836875.1_MGYG-HGUT-04886",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-02-03",
    "dateModified": "2021-02-03",
    "datePublished": "2021-02-03",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Oscillospiraceae bacterium"
        ],
        "sample_taxid": [
            "2485925"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Denmark"
        ],
        "sample_host_location_id": [],
        "data_size": "0.463 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 41.67,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1610656",
        "Number of Sequences": "299",
        "Longest Sequences (bp)": "23866",
        "N50 (bp)": "6301",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "57.5",
        "Number of CDSs": "1306",
        "Average Protein Length": "292.8",
        "Coding Ratio (%)": "71.2",
        "Number of rRNAs": "0",
        "Number of tRNAs": "9",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 41.67,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
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                "accession": "GCA_900549635.1",
                "gtdb_species": "s__CAG-170 sp900549635",
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                "matched_fragments": 299,
                "total_fragments": 388,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__CAG-170",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.02",
                "min_intra_species_ani": "95.99",
                "mean_intra_species_af": "0.80",
                "min_intra_species_af": "0.73",
                "num_clustered_genomes": 4,
                "status": "conclusive"
            },
            {
                "accession": "GCA_003516765.1",
                "gtdb_species": "s__CAG-170 sp003516765",
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                "matched_fragments": 224,
                "total_fragments": 388,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__CAG-170",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.93",
                "min_intra_species_ani": "96.75",
                "mean_intra_species_af": "0.73",
                "min_intra_species_af": "0.72",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCA_002437575.1",
                "gtdb_species": "s__CAG-170 sp002437575",
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                "matched_fragments": 232,
                "total_fragments": 388,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__CAG-170",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_000432135.1",
                "gtdb_species": "s__CAG-170 sp000432135",
                "ani": 80.9122,
                "matched_fragments": 143,
                "total_fragments": 388,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__CAG-170",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.47",
                "min_intra_species_ani": "98.15",
                "mean_intra_species_af": "0.85",
                "min_intra_species_af": "0.82",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_002404795.1",
                "gtdb_species": "s__CAG-170 sp002404795",
                "ani": 79.656,
                "matched_fragments": 137,
                "total_fragments": 388,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__CAG-170",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.77",
                "min_intra_species_ani": "95.28",
                "mean_intra_species_af": "0.76",
                "min_intra_species_af": "0.71",
                "num_clustered_genomes": 13,
                "status": "-"
            },
            {
                "accession": "GCA_000436735.1",
                "gtdb_species": "s__CAG-170 sp000436735",
                "ani": 79.5417,
                "matched_fragments": 136,
                "total_fragments": 388,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__CAG-170",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.61",
                "min_intra_species_ani": "96.80",
                "mean_intra_species_af": "0.78",
                "min_intra_species_af": "0.67",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_004555655.1",
                "gtdb_species": "s__CAG-170 sp004555655",
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                "total_fragments": 388,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__CAG-170",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900553545.1",
                "gtdb_species": "s__CAG-170 sp900553545",
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                "total_fragments": 388,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__CAG-170",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.26",
                "min_intra_species_ani": "97.22",
                "mean_intra_species_af": "0.73",
                "min_intra_species_af": "0.69",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_016297855.1",
                "gtdb_species": "s__CAG-170 sp016297855",
                "ani": 78.4538,
                "matched_fragments": 85,
                "total_fragments": 388,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__CAG-170",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_905214155.1",
                "gtdb_species": "s__CAG-170 sp905214155",
                "ani": 78.0243,
                "matched_fragments": 118,
                "total_fragments": 388,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__CAG-170",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902803075.1",
                "gtdb_species": "s__CAG-170 sp902803075",
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                "matched_fragments": 81,
                "total_fragments": 388,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__CAG-170",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.302,
        "cell_length": 0.397,
        "doubling_h": null,
        "growth_tmp": 30.0,
        "optimum_tmp": 30.0,
        "optimum_ph": 6.25,
        "genome_size": 4470621.5,
        "gc_content": 49.895,
        "coding_genes": 4347.333,
        "rRNA16S_genes": 3.0,
        "tRNA_genes": 61.0,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Oscillospirales",
        "f__Oscillospiraceae",
        "g__CAG-170",
        "s__CAG-170 sp900549635"
    ],
    "_genome_taxon": [
        "Oscillospiraceae",
        "bacterium",
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Oscillospirales",
        "f__Oscillospiraceae",
        "g__CAG-170",
        "s__CAG-170 sp900549635",
        "Bacteria",
        "Bacillota",
        "A",
        "Clostridia",
        "Oscillospirales",
        "Oscillospiraceae",
        "CAG-170",
        "CAG-170",
        "sp900549635"
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}