{ "type": "genome", "identifier": "GCA_902837085.1", "organism": "Erysipelotrichaceae bacterium", "title": "Erysipelotrichaceae bacterium", "description": "derived from metagenome; fragmented assembly; genus undefined", "data type": "Genome sequencing and assembly", "organization": "EMG", "publication": [ {} ], "properties": { "assembly_accession": "GCA_902837085.1", "bioproject": "PRJEB37358", "biosample": "SAMEA6784319", "wgs_master": "CADFSZ000000000.1", "refseq_category": "na", "taxid": "2049044", "species_taxid": "2049044", "organism_name": "Erysipelotrichaceae bacterium", "infraspecific_name": "", "isolate": "MGYG-HGUT-04922", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/02/03", "asm_name": "MGYG-HGUT-04922", "submitter": "EMG", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/902/837/085/GCA_902837085.1_MGYG-HGUT-04922", "excluded_from_refseq": "derived from metagenome; fragmented assembly; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-02-03", "dateModified": "2021-02-03", "datePublished": "2021-02-03", "_annotation": { "sample_count": 1, "sample_organism": [ "Erysipelotrichaceae bacterium" ], "sample_taxid": [ "2049044" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Denmark" ], "sample_host_location_id": [], "data_size": "0.349 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 47.45, "contamination": 4.17, "strain_heterogeneity": 100.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "1211072", "Number of Sequences": 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"GCF_003458715.1", "gtdb_species": "s__Holdemanella sp003458715", "ani": 89.5898, "matched_fragments": 174, "total_fragments": 190, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Holdemanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.81", "min_intra_species_ani": "97.17", "mean_intra_species_af": "0.85", "min_intra_species_af": "0.77", "num_clustered_genomes": 7, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": -0.333, "cell_length": 0.183, "doubling_h": null, "growth_tmp": 36.057, "optimum_tmp": 36.214, "optimum_ph": 7.27, "genome_size": 2715599.544, "gc_content": 38.082, "coding_genes": 2417.7, "rRNA16S_genes": 7.3, "tRNA_genes": 50.0, "gram_stain": 1.0, "sporulation": 0.235, "motility": 0.3, "range_salinity": null, "facultative_respiration": 0.0, "anaerobic_respiration": 0.869, "aerobic_respiration": 0.13, "mesophilic_range_tmp": 1.0, "thermophilic_range_tmp": 0.0, "psychrophilic_range_tmp": 0.0, "bacillus_cell_shape": 0.933, "coccus_cell_shape": 0.0, "filament_cell_shape": 0.0, "coccobacillus_cell_shape": 0.0, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.066 }, "_gtdb_taxon": [ "d__Bacteria", "p__Bacillota_I", "c__Bacilli_A", "o__Erysipelotrichales", "f__Erysipelotrichaceae", "g__Holdemanella", "s__Holdemanella sp900556915" ], "_genome_taxon": [ "Erysipelotrichaceae", "bacterium", "d__Bacteria", "p__Bacillota_I", "c__Bacilli_A", "o__Erysipelotrichales", "f__Erysipelotrichaceae", "g__Holdemanella", "s__Holdemanella sp900556915", "Bacteria", "Bacillota", "I", "Bacilli", "A", "Erysipelotrichales", "Erysipelotrichaceae", "Holdemanella", "Holdemanella", "sp900556915" ], "quality": 2, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f" }