{
    "type": "genome",
    "identifier": "GCA_903822865.1",
    "organism": "Candidatus Omnitrophica bacterium",
    "title": "Candidatus Omnitrophica bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "BILS",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_903822865.1",
        "bioproject": "PRJEB38681",
        "biosample": "SAMEA6944561",
        "wgs_master": "CAIJQO000000000.1",
        "refseq_category": "na",
        "taxid": "2035772",
        "species_taxid": "2035772",
        "organism_name": "Candidatus Omnitrophica bacterium",
        "infraspecific_name": "",
        "isolate": "MJ-2014-D4_bin-263",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/07/18",
        "asm_name": "freshwater MAG --- MJ-2014-D4_bin-263",
        "submitter": "BILS",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/903/822/865/GCA_903822865.1_freshwater_MAG_---_MJ-2014-D4_bin-263",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-07-18",
    "dateModified": "2020-07-18",
    "datePublished": "2020-07-18",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Candidatus Omnitrophota bacterium"
        ],
        "sample_taxid": [
            "2035772"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Finland"
        ],
        "sample_host_location_id": [],
        "data_size": "0.676 MB",
        "sample_ph_range": {
            "min": 564.0,
            "max": 564.0
        },
        "sample_temperature_range": {
            "min": 93.0,
            "max": 93.0
        },
        "completeness": 95.37,
        "contamination": 0.46,
        "strain_heterogeneity": 100.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2370580",
        "Number of Sequences": "62",
        "Longest Sequences (bp)": "201616",
        "N50 (bp)": "54114",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "54.6",
        "Number of CDSs": "2175",
        "Average Protein Length": "327.2",
        "Coding Ratio (%)": "90.1",
        "Number of rRNAs": "2",
        "Number of tRNAs": "45",
        "Number of CRISPRs": "3"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 95.37,
            "contamination": 0.46,
            "strain_heterogeneity": 100.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_903901225.1",
                "gtdb_species": "s__GCA-2753465 sp903901225",
                "ani": 99.9836,
                "matched_fragments": 748,
                "total_fragments": 755,
                "gtdb_taxonomy": "d__Bacteria;p__Omnitrophota;c__Koll11;o__UBA10015;f__GCA-002753745;g__GCA-2753465",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.99",
                "min_intra_species_ani": "99.98",
                "mean_intra_species_af": "0.98",
                "min_intra_species_af": "0.96",
                "num_clustered_genomes": 7,
                "status": "conclusive"
            },
            {
                "accession": "GCA_903861305.1",
                "gtdb_species": "s__GCA-2753465 sp903861305",
                "ani": 84.8747,
                "matched_fragments": 318,
                "total_fragments": 755,
                "gtdb_taxonomy": "d__Bacteria;p__Omnitrophota;c__Koll11;o__UBA10015;f__GCA-002753745;g__GCA-2753465",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903836515.1",
                "gtdb_species": "s__GCA-2753465 sp903836515",
                "ani": 78.0133,
                "matched_fragments": 177,
                "total_fragments": 755,
                "gtdb_taxonomy": "d__Bacteria;p__Omnitrophota;c__Koll11;o__UBA10015;f__GCA-002753745;g__GCA-2753465",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.88",
                "min_intra_species_ani": "99.76",
                "mean_intra_species_af": "0.96",
                "min_intra_species_af": "0.96",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_903860135.1",
                "gtdb_species": "s__GCA-2753465 sp903860135",
                "ani": 77.6909,
                "matched_fragments": 135,
                "total_fragments": 755,
                "gtdb_taxonomy": "d__Bacteria;p__Omnitrophota;c__Koll11;o__UBA10015;f__GCA-002753745;g__GCA-2753465",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903959815.1",
                "gtdb_species": "s__GCA-2753465 sp903959815",
                "ani": 77.2912,
                "matched_fragments": 96,
                "total_fragments": 755,
                "gtdb_taxonomy": "d__Bacteria;p__Omnitrophota;c__Koll11;o__UBA10015;f__GCA-002753745;g__GCA-2753465",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.78",
                "min_intra_species_ani": "99.78",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_903908245.1",
                "gtdb_species": "s__GCA-2753745 sp903908245",
                "ani": 77.2803,
                "matched_fragments": 99,
                "total_fragments": 755,
                "gtdb_taxonomy": "d__Bacteria;p__Omnitrophota;c__Koll11;o__UBA10015;f__GCA-002753745;g__GCA-2753745",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.88",
                "min_intra_species_ani": "99.87",
                "mean_intra_species_af": "0.96",
                "min_intra_species_af": "0.95",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_015234065.1",
                "gtdb_species": "s__JADFWS01 sp015234065",
                "ani": 76.6617,
                "matched_fragments": 72,
                "total_fragments": 755,
                "gtdb_taxonomy": "d__Bacteria;p__Omnitrophota;c__Koll11;o__UBA10015;f__GCA-002753745;g__JADFWS01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002753465.1",
                "gtdb_species": "s__GCA-2753465 sp002753465",
                "ani": 76.5517,
                "matched_fragments": 85,
                "total_fragments": 755,
                "gtdb_taxonomy": "d__Bacteria;p__Omnitrophota;c__Koll11;o__UBA10015;f__GCA-002753745;g__GCA-2753465",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.84",
                "min_intra_species_ani": "99.84",
                "mean_intra_species_af": "0.75",
                "min_intra_species_af": "0.75",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_012514595.1",
                "gtdb_species": "s__JAAYZZ01 sp012514595",
                "ani": 76.3966,
                "matched_fragments": 64,
                "total_fragments": 755,
                "gtdb_taxonomy": "d__Bacteria;p__Omnitrophota;c__Koll11;o__UBA10015;f__GCA-002753745;g__JAAYZZ01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Omnitrophota",
        "c__Koll11",
        "o__Zapsychrales",
        "f__Fredricksoniimonadaceae",
        "g__Fredricksoniimonas",
        "s__Fredricksoniimonas borealis"
    ],
    "_genome_taxon": [
        "Candidatus",
        "Omnitrophica",
        "bacterium",
        "d__Bacteria",
        "p__Omnitrophota",
        "c__Koll11",
        "o__Zapsychrales",
        "f__Fredricksoniimonadaceae",
        "g__Fredricksoniimonas",
        "s__Fredricksoniimonas borealis",
        "Bacteria",
        "Omnitrophota",
        "Koll11",
        "Zapsychrales",
        "Fredricksoniimonadaceae",
        "Fredricksoniimonas",
        "Fredricksoniimonas",
        "borealis"
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        },
        {
            "id": "MEO_0000024",
            "label": "lake"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}