{ "tc_result": [ { "organism_name": "Pseudomethylobacillus aquaticus", "strain": "strain=H-5", "accession": "GCA_003730115.1", "taxid": 2676064, "species_taxid": 2676064, "relation_to_type": "type", "validated": true, "ani": 76.8096, "matched_fragments": 127, "total_fragments": 1045, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Novimethylophilus kurashikiensis", "strain": "strain=La2-4", "accession": "GCA_003112435.1", "taxid": 1825523, "species_taxid": 1825523, "relation_to_type": "type", "validated": true, "ani": 76.7903, "matched_fragments": 141, "total_fragments": 1045, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylovorus mays", "strain": "strain=VKM B-2221", "accession": "GCA_020531915.1", "taxid": 184077, "species_taxid": 184077, "relation_to_type": "type", "validated": true, "ani": 76.782, "matched_fragments": 104, "total_fragments": 1045, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylovorus glucosotrophus", "strain": "strain=DSM 6874", "accession": "GCA_009858335.1", "taxid": 266009, "species_taxid": 266009, "relation_to_type": "type", "validated": true, "ani": 76.7139, "matched_fragments": 103, "total_fragments": 1045, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacillus arboreus", "strain": "strain=VKM B-2590", "accession": "GCA_020532725.1", "taxid": 755170, "species_taxid": 755170, "relation_to_type": "type", "validated": true, "ani": 76.6185, "matched_fragments": 97, "total_fragments": 1045, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylovorus menthalis", "strain": "strain=VKM B-2663", "accession": "GCA_020523625.1", "taxid": 1002227, "species_taxid": 1002227, "relation_to_type": "type", "validated": true, "ani": 76.5686, "matched_fragments": 88, "total_fragments": 1045, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacillus flagellatus", "strain": "strain=KT", "accession": "GCA_000013705.1", "taxid": 405, "species_taxid": 405, "relation_to_type": "type", "validated": true, "ani": 76.4308, "matched_fragments": 94, "total_fragments": 1045, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfuriferula multivorans", "strain": "strain=TTN", "accession": "GCA_003851125.1", "taxid": 1559896, "species_taxid": 1559896, "relation_to_type": "type", "validated": true, "ani": 76.4049, "matched_fragments": 65, "total_fragments": 1045, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azoarcus indigens", "strain": "strain=DSM 12121", "accession": "GCA_004361735.1", "taxid": 29545, "species_taxid": 29545, "relation_to_type": "type", "validated": true, "ani": 76.3362, "matched_fragments": 78, "total_fragments": 1045, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Burkholderia glumae", "strain": "strain=LMG 2196", "accession": "GCA_902832765.1", "taxid": 337, "species_taxid": 337, "relation_to_type": "type", "validated": true, "ani": 76.3114, "matched_fragments": 54, "total_fragments": 1045, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azoarcus indigens", "strain": "strain=VB32", "accession": "GCA_012910835.1", "taxid": 29545, "species_taxid": 29545, "relation_to_type": "type", "validated": true, "ani": 76.3108, "matched_fragments": 76, "total_fragments": 1045, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azonexus fungiphilus", "strain": "strain=DSM 23841", "accession": "GCA_003634965.1", "taxid": 146940, "species_taxid": 146940, "relation_to_type": "type", "validated": true, "ani": 76.2784, "matched_fragments": 68, "total_fragments": 1045, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfuriferula plumbiphila", "strain": "strain=Gro7", "accession": "GCA_009938015.1", "taxid": 171865, "species_taxid": 171865, "relation_to_type": "type", "validated": true, "ani": 76.2483, "matched_fragments": 69, "total_fragments": 1045, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfuriferula plumbiphila", "strain": "strain=NBRC 107929", "accession": "GCA_007992375.1", "taxid": 171865, "species_taxid": 171865, "relation_to_type": "type", "validated": true, "ani": 76.2353, "matched_fragments": 67, "total_fragments": 1045, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Collimonas humicola", "strain": "strain=RLT1W51", "accession": "GCA_018304945.1", "taxid": 2825886, "species_taxid": 2825886, "relation_to_type": "type", "validated": true, "ani": 76.0895, "matched_fragments": 58, "total_fragments": 1045, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacillus gramineus", "strain": "strain=VKM B-2591", "accession": "GCA_020532675.1", "taxid": 755169, "species_taxid": 755169, "relation_to_type": "type", "validated": true, "ani": 76.0458, "matched_fragments": 72, "total_fragments": 1045, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pelomonas puraquae", "strain": "strain=CCUG 52769", "accession": "GCA_002205845.1", "taxid": 431059, "species_taxid": 431059, "relation_to_type": "type", "validated": true, "ani": 75.6015, "matched_fragments": 54, "total_fragments": 1045, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 95.83, "contamination": 8.8, "strain_heterogeneity": 20.0 }, "gtdb_result": [ { "accession": "GCA_903824575.1", "gtdb_species": "s__CAIJXJ01 sp903824575", "ani": 100.0, "matched_fragments": 1038, "total_fragments": 1045, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Methylophilaceae;g__CAIJXJ01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.81", "min_intra_species_ani": "99.81", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "conclusive" }, { "accession": "GCF_001645185.1", "gtdb_species": "s__MM2 sp001645185", "ani": 77.4622, "matched_fragments": 191, "total_fragments": 1045, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Methylophilaceae;g__MM2", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_001704575.1", "gtdb_species": "s__UBA6140 sp001704575", "ani": 77.0468, "matched_fragments": 106, "total_fragments": 1045, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Methylophilaceae;g__UBA6140", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_902168195.1", "gtdb_species": "s__CABHOJ01 sp902168195", "ani": 77.0371, "matched_fragments": 89, "total_fragments": 1045, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Methylophilaceae;g__CABHOJ01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002842435.1", "gtdb_species": "s__UBA6140 sp002842435", "ani": 76.8566, "matched_fragments": 138, "total_fragments": 1045, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Methylophilaceae;g__UBA6140", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_017880825.1", "gtdb_species": "s__JADGRN01 sp017880825", "ani": 76.8478, "matched_fragments": 77, "total_fragments": 1045, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Methylophilaceae;g__JADGRN01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003730115.1", "gtdb_species": "s__Pseudomethylobacillus aquaticus", "ani": 76.8096, "matched_fragments": 127, "total_fragments": 1045, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Methylophilaceae;g__Pseudomethylobacillus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_005502435.1", "gtdb_species": "s__Pseudomethylobacillus flagellatus_A", "ani": 76.8029, "matched_fragments": 122, "total_fragments": 1045, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Methylophilaceae;g__Pseudomethylobacillus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009858335.1", "gtdb_species": "s__Methylovorus glucosotrophus", "ani": 76.7349, "matched_fragments": 102, "total_fragments": 1045, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Methylophilaceae;g__Methylovorus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.11", "min_intra_species_ani": "97.01", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.92", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCA_905339275.1", "gtdb_species": "s__UBA6140 sp905339275", "ani": 76.6287, "matched_fragments": 116, "total_fragments": 1045, "gtdb_taxonomy": 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"d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Sulfuriferulaceae;g__Sulfuriferula", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009938015.1", "gtdb_species": "s__Sulfuriferula plumbiphila", "ani": 76.2483, "matched_fragments": 69, "total_fragments": 1045, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Sulfuriferulaceae;g__Sulfuriferula", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_002842135.1", "gtdb_species": "s__UBA6140 sp002842135", "ani": 76.1764, "matched_fragments": 75, "total_fragments": 1045, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Methylophilaceae;g__UBA6140", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002403375.1", "gtdb_species": "s__Thiobacillus denitrificans_E", "ani": 75.989, "matched_fragments": 68, "total_fragments": 1045, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Thiobacillaceae;g__Thiobacillus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.98", "min_intra_species_ani": "99.98", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" } ] }