{
    "type": "genome",
    "identifier": "GCA_903828285.1",
    "organism": "uncultured Thiodictyon sp.",
    "title": "uncultured Thiodictyon sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "BILS",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_903828285.1",
        "bioproject": "PRJEB38681",
        "biosample": "SAMEA6954362",
        "wgs_master": "CAIKLR000000000.1",
        "refseq_category": "na",
        "taxid": "1846217",
        "species_taxid": "1846217",
        "organism_name": "uncultured Thiodictyon sp.",
        "infraspecific_name": "",
        "isolate": "KTt_bin-1499",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/07/20",
        "asm_name": "freshwater MAG --- KTt_bin-1499",
        "submitter": "BILS",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/903/828/285/GCA_903828285.1_freshwater_MAG_---_KTt_bin-1499",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-07-20",
    "dateModified": "2020-07-20",
    "datePublished": "2020-07-20",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Thiodictyon sp."
        ],
        "sample_taxid": [
            "1846217"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Sweden"
        ],
        "sample_host_location_id": [],
        "data_size": "1.537 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 64.69,
        "contamination": 2.89,
        "strain_heterogeneity": 20.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "5422306",
        "Number of Sequences": "2156",
        "Longest Sequences (bp)": "13217",
        "N50 (bp)": "2502",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "66.4",
        "Number of CDSs": "3132",
        "Average Protein Length": "253.7",
        "Coding Ratio (%)": "44.0",
        "Number of rRNAs": "0",
        "Number of tRNAs": "31",
        "Number of CRISPRs": "3"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "species_taxid": 553982,
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            },
            {
                "organism_name": "Thiorhodococcus minor",
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                "species_taxid": 57489,
                "relation_to_type": "type",
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                "status": "below_threshold"
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            {
                "organism_name": "Thiocystis violacea",
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                "accession": "GCA_016583575.1",
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                "ani": 78.1497,
                "matched_fragments": 100,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Allochromatium vinosum",
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                "accession": "GCA_000025485.1",
                "taxid": 1049,
                "species_taxid": 1049,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
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                "strain": "strain=DSM 235",
                "accession": "GCA_003634315.1",
                "taxid": 69360,
                "species_taxid": 69360,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.8176,
                "matched_fragments": 91,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Thiocapsa roseopersicina",
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                "accession": "GCA_900106925.1",
                "taxid": 1058,
                "species_taxid": 1058,
                "relation_to_type": "type",
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                "ani": 77.7905,
                "matched_fragments": 83,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Allochromatium humboldtianum",
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                "accession": "GCA_013385175.1",
                "taxid": 504901,
                "species_taxid": 504901,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.774,
                "matched_fragments": 103,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Thiocapsa bogorovii",
                "strain": "strain=BBS",
                "accession": "GCA_021228795.1",
                "taxid": 521689,
                "species_taxid": 521689,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.7543,
                "matched_fragments": 74,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Thiocapsa marina",
                "strain": "strain=5811",
                "accession": "GCA_000223985.2",
                "taxid": 244573,
                "species_taxid": 244573,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.467,
                "matched_fragments": 82,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Thiohalocapsa marina",
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                "accession": "GCA_008632335.1",
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                "species_taxid": 424902,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 90,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
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                "accession": "GCA_000327045.1",
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                "validated": true,
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                "matched_fragments": 85,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Azospirillum thermophilum",
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                "accession": "GCA_003130795.1",
                "taxid": 2202148,
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                "matched_fragments": 51,
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            }
        ],
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        "gtdb_result": [
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                "accession": "GCF_002813775.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Thiodictyon",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            {
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            {
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                "accession": "GCF_000379525.1",
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": 0.176,
        "cell_length": 0.477,
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        "bacillus_cell_shape": 1.0,
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    "_gtdb_taxon": [
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        "f__Chromatiaceae",
        "g__Thiodictyon",
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    ],
    "_genome_taxon": [
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        "f__Chromatiaceae",
        "g__Thiodictyon",
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        "Pseudomonadota",
        "Gammaproteobacteria",
        "Chromatiales",
        "Chromatiaceae",
        "Thiodictyon",
        "s",
        "",
        ""
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        },
        {
            "id": "MEO_0000024",
            "label": "lake"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}