{ "type": "genome", "identifier": "GCA_903828845.1", "organism": "uncultured Caulobacteraceae bacterium", "title": "uncultured Caulobacteraceae bacterium", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "BILS", "publication": [ {} ], "properties": { "assembly_accession": "GCA_903828845.1", "bioproject": "PRJEB38681", "biosample": "SAMEA6956393", "wgs_master": "CAIKNW000000000.1", "refseq_category": "na", "taxid": "211442", "species_taxid": "211442", "organism_name": "uncultured Caulobacteraceae bacterium", "infraspecific_name": "", "isolate": "Umea_bin-08409", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/07/18", "asm_name": "freshwater MAG --- Umea_bin-08409", "submitter": "BILS", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/903/828/845/GCA_903828845.1_freshwater_MAG_---_Umea_bin-08409", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-07-18", "dateModified": "2020-07-18", "datePublished": "2020-07-18", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Caulobacteraceae bacterium" ], "sample_taxid": [ "211442" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Sweden" ], "sample_host_location_id": [], "data_size": "0.586 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 27.08, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2106219", "Number of Sequences": "593", "Longest Sequences (bp)": "18173", "N50 (bp)": "4003", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "67.9", "Number of CDSs": "1656", "Average Protein Length": "258.7", "Coding Ratio (%)": "61.0", "Number of rRNAs": "0", "Number of tRNAs": "27", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Caulobacter rhizosphaerae", "strain": "strain=CGMCC 1.15915", "accession": "GCA_014645055.1", "taxid": 2010972, "species_taxid": 2010972, "relation_to_type": "type", "validated": true, "ani": 77.146, "matched_fragments": 127, "total_fragments": 368, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Caulobacter rhizosphaerae", "strain": "strain=KCTC 52515", "accession": "GCA_010977555.1", "taxid": 2010972, "species_taxid": 2010972, "relation_to_type": "type", "validated": true, "ani": 77.146, "matched_fragments": 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"status": "below_threshold" }, { "organism_name": "Brevundimonas subvibrioides", "strain": "strain=ATCC 15264", "accession": "GCA_000144605.1", "taxid": 74313, "species_taxid": 74313, "relation_to_type": "type", "validated": true, "ani": 76.1641, "matched_fragments": 68, "total_fragments": 368, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Brevundimonas bullata", "strain": "strain=HAMBI_262", "accession": "GCA_003350205.1", "taxid": 13160, "species_taxid": 13160, "relation_to_type": "type", "validated": true, "ani": 76.147, "matched_fragments": 77, "total_fragments": 368, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Brevundimonas pondensis", "strain": "strain=LVF1", "accession": "GCA_017487345.1", "taxid": 2774189, "species_taxid": 2774189, "relation_to_type": "type", "validated": true, "ani": 75.8766, "matched_fragments": 72, "total_fragments": 368, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": 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