{ "type": "genome", "identifier": "GCA_903829305.1", "organism": "uncultured Opitutaceae bacterium", "title": "uncultured Opitutaceae bacterium", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "BILS", "publication": [ {} ], "properties": { "assembly_accession": "GCA_903829305.1", "bioproject": "PRJEB38681", "biosample": "SAMEA6946545", "wgs_master": "CAIKPP000000000.1", "refseq_category": "na", "taxid": "333967", "species_taxid": "333967", "organism_name": "uncultured Opitutaceae bacterium", "infraspecific_name": "", "isolate": "AM5_bin-1357", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/07/19", "asm_name": "freshwater MAG --- AM5_bin-1357", "submitter": "BILS", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/903/829/305/GCA_903829305.1_freshwater_MAG_---_AM5_bin-1357", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-07-19", "dateModified": "2020-07-19", "datePublished": "2020-07-19", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Opitutaceae bacterium" ], "sample_taxid": [ "333967" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Finland" ], "sample_host_location_id": [], "data_size": "0.856 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": 44.0, "max": 44.0 }, "completeness": 89.39, "contamination": 4.17, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nibricoccus aquaticus", "strain": "strain=HZ-65", "accession": "GCA_002310495.1", "taxid": 2576891, "species_taxid": 2576891, "relation_to_type": "type", "validated": true, "ani": 76.4858, "matched_fragments": 50, "total_fragments": 694, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 89.39, "contamination": 4.17, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_903862935.1", "gtdb_species": "s__Palsa-1447 sp903862935", "ani": 99.8856, "matched_fragments": 673, "total_fragments": 694, "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Opitutales;f__Opitutaceae;g__Palsa-1447", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.95", "min_intra_species_ani": "99.89", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.97", "num_clustered_genomes": 5, "status": "conclusive" }, { "accession": "GCA_903825285.1", 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