{
    "type": "genome",
    "identifier": "GCA_903830125.1",
    "organism": "uncultured Noviherbaspirillum sp.",
    "title": "uncultured Noviherbaspirillum sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "BILS",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_903830125.1",
        "bioproject": "PRJEB38681",
        "biosample": "SAMEA6946124",
        "wgs_master": "CAIKST000000000.1",
        "refseq_category": "na",
        "taxid": "1636081",
        "species_taxid": "1636081",
        "organism_name": "uncultured Noviherbaspirillum sp.",
        "infraspecific_name": "",
        "isolate": "Erken-D2_bin-1101",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/07/17",
        "asm_name": "freshwater MAG --- Erken-D2_bin-1101",
        "submitter": "BILS",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/903/830/125/GCA_903830125.1_freshwater_MAG_---_Erken-D2_bin-1101",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-07-17",
    "dateModified": "2020-07-17",
    "datePublished": "2020-07-17",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Noviherbaspirillum sp."
        ],
        "sample_taxid": [
            "1636081"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Sweden"
        ],
        "sample_host_location_id": [],
        "data_size": "0.379 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": 215.0,
            "max": 215.0
        },
        "completeness": 57.87,
        "contamination": 4.17,
        "strain_heterogeneity": 100.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1298837",
        "Number of Sequences": "508",
        "Longest Sequences (bp)": "9295",
        "N50 (bp)": "2622",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "49.1",
        "Number of CDSs": "832",
        "Average Protein Length": "257.7",
        "Coding Ratio (%)": "49.5",
        "Number of rRNAs": "0",
        "Number of tRNAs": "9",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 57.87,
            "contamination": 4.17,
            "strain_heterogeneity": 100.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_903846425.1",
                "gtdb_species": "s__SYFN01 sp903846425",
                "ani": 98.0246,
                "matched_fragments": 107,
                "total_fragments": 127,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__SYFN01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.24",
                "min_intra_species_ani": "98.19",
                "mean_intra_species_af": "0.76",
                "min_intra_species_af": "0.73",
                "num_clustered_genomes": 3,
                "status": "conclusive"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": 0.035,
        "cell_length": 0.311,
        "doubling_h": null,
        "growth_tmp": 28.2,
        "optimum_tmp": 26.2,
        "optimum_ph": 6.75,
        "genome_size": 5334859.666,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 1.0,
        "range_salinity": null,
        "facultative_respiration": 0.166,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 0.833,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Burkholderiales",
        "f__Burkholderiaceae",
        "g__SYFN01",
        "s__SYFN01 sp903846425"
    ],
    "_genome_taxon": [
        "uncultured",
        "Noviherbaspirillum",
        "sp.",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Burkholderiales",
        "f__Burkholderiaceae",
        "g__SYFN01",
        "s__SYFN01 sp903846425",
        "Bacteria",
        "Pseudomonadota",
        "Gammaproteobacteria",
        "Burkholderiales",
        "Burkholderiaceae",
        "SYFN01",
        "SYFN01",
        "sp903846425"
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        },
        {
            "id": "MEO_0000024",
            "label": "lake"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}