{
    "type": "genome",
    "identifier": "GCA_903830705.1",
    "organism": "uncultured beta proteobacterium",
    "title": "uncultured beta proteobacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "BILS",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_903830705.1",
        "bioproject": "PRJEB38681",
        "biosample": "SAMEA6950408",
        "wgs_master": "CAIKUW000000000.1",
        "refseq_category": "na",
        "taxid": "86027",
        "species_taxid": "86027",
        "organism_name": "uncultured beta proteobacterium",
        "infraspecific_name": "",
        "isolate": "E1_bin-458",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/07/17",
        "asm_name": "freshwater MAG --- E1_bin-458",
        "submitter": "BILS",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/903/830/705/GCA_903830705.1_freshwater_MAG_---_E1_bin-458",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-07-17",
    "dateModified": "2020-07-17",
    "datePublished": "2020-07-17",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured beta proteobacterium"
        ],
        "sample_taxid": [
            "86027"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Canada"
        ],
        "sample_host_location_id": [],
        "data_size": "0.286 MB",
        "sample_ph_range": {
            "min": 638.0,
            "max": 638.0
        },
        "sample_temperature_range": {
            "min": 124.0,
            "max": 124.0
        },
        "completeness": 32.58,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "977771",
        "Number of Sequences": "397",
        "Longest Sequences (bp)": "9064",
        "N50 (bp)": "2432",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "46.8",
        "Number of CDSs": "582",
        "Average Protein Length": "259.4",
        "Coding Ratio (%)": "46.3",
        "Number of rRNAs": "0",
        "Number of tRNAs": "16",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Polynucleobacter finlandensis",
                "strain": "strain=MWH-Mekk-B1",
                "accession": "GCA_018881755.1",
                "taxid": 1855894,
                "species_taxid": 1855894,
                "relation_to_type": "type",
                "validated": true,
                "ani": 97.1275,
                "matched_fragments": 74,
                "total_fragments": 79,
                "ani_threshold": 95,
                "status": "conclusive"
            }
        ],
        "cc_result": {
            "completeness": 32.58,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_018881755.1",
                "gtdb_species": "s__Polynucleobacter sp903953215",
                "ani": 97.1275,
                "matched_fragments": 74,
                "total_fragments": 79,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Polynucleobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.19",
                "min_intra_species_ani": "97.38",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 15,
                "status": "conclusive"
            },
            {
                "accession": "GCA_903843235.1",
                "gtdb_species": "s__Polynucleobacter sp903843235",
                "ani": 87.9081,
                "matched_fragments": 63,
                "total_fragments": 79,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Polynucleobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.64",
                "min_intra_species_ani": "99.31",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.84",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCA_903845455.1",
                "gtdb_species": "s__Polynucleobacter sp903845455",
                "ani": 83.33,
                "matched_fragments": 66,
                "total_fragments": 79,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Polynucleobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.50",
                "min_intra_species_ani": "98.25",
                "mean_intra_species_af": "0.75",
                "min_intra_species_af": "0.69",
                "num_clustered_genomes": 7,
                "status": "-"
            },
            {
                "accession": "GCF_018881925.1",
                "gtdb_species": "s__Polynucleobacter sp903880555",
                "ani": 83.1319,
                "matched_fragments": 69,
                "total_fragments": 79,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Polynucleobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.13",
                "min_intra_species_ani": "99.10",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_903858445.1",
                "gtdb_species": "s__Polynucleobacter sp903858445",
                "ani": 81.2472,
                "matched_fragments": 60,
                "total_fragments": 79,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Polynucleobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Burkholderiales",
        "f__Burkholderiaceae",
        "g__Polynucleobacter",
        "s__Polynucleobacter finlandensis"
    ],
    "_genome_taxon": [
        "uncultured",
        "beta",
        "proteobacterium",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Burkholderiales",
        "f__Burkholderiaceae",
        "g__Polynucleobacter",
        "s__Polynucleobacter finlandensis",
        "Bacteria",
        "Pseudomonadota",
        "Gammaproteobacteria",
        "Burkholderiales",
        "Burkholderiaceae",
        "Polynucleobacter",
        "Polynucleobacter",
        "finlandensis"
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        },
        {
            "id": "MEO_0000027",
            "label": "pond"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}