{
    "type": "genome",
    "identifier": "GCA_903830975.1",
    "organism": "uncultured Schlesneria sp.",
    "title": "uncultured Schlesneria sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "BILS",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_903830975.1",
        "bioproject": "PRJEB38681",
        "biosample": "SAMEA6953465",
        "wgs_master": "CAIKWC000000000.1",
        "refseq_category": "na",
        "taxid": "904984",
        "species_taxid": "904984",
        "organism_name": "uncultured Schlesneria sp.",
        "infraspecific_name": "",
        "isolate": "Umea3p3_bin-0942",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/07/20",
        "asm_name": "freshwater MAG --- Umea3p3_bin-0942",
        "submitter": "BILS",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/903/830/975/GCA_903830975.1_freshwater_MAG_---_Umea3p3_bin-0942",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-07-20",
    "dateModified": "2020-07-20",
    "datePublished": "2020-07-20",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Schlesneria sp."
        ],
        "sample_taxid": [
            "904984"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Sweden"
        ],
        "sample_host_location_id": [],
        "data_size": "2.407 MB",
        "sample_ph_range": {
            "min": 495.0,
            "max": 495.0
        },
        "sample_temperature_range": {
            "min": 41.0,
            "max": 41.0
        },
        "completeness": 62.93,
        "contamination": 4.55,
        "strain_heterogeneity": 100.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "8389919",
        "Number of Sequences": "1346",
        "Longest Sequences (bp)": "48125",
        "N50 (bp)": "8062",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "52.2",
        "Number of CDSs": "5534",
        "Average Protein Length": "342.7",
        "Coding Ratio (%)": "67.8",
        "Number of rRNAs": "0",
        "Number of tRNAs": "48",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Schlesneria paludicola",
                "strain": "strain=DSM 18645",
                "accession": "GCA_000255655.1",
                "taxid": 360056,
                "species_taxid": 360056,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.9146,
                "matched_fragments": 160,
                "total_fragments": 2101,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 62.93,
            "contamination": 4.55,
            "strain_heterogeneity": 100.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_903834925.1",
                "gtdb_species": "s__Schlesneria sp903834925",
                "ani": 99.9366,
                "matched_fragments": 2049,
                "total_fragments": 2101,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Planctomycetales;f__Planctomycetaceae;g__Schlesneria",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.97",
                "min_intra_species_ani": "99.97",
                "mean_intra_species_af": "0.97",
                "min_intra_species_af": "0.97",
                "num_clustered_genomes": 2,
                "status": "conclusive"
            },
            {
                "accession": "GCA_903904835.1",
                "gtdb_species": "s__Schlesneria sp903904835",
                "ani": 82.3984,
                "matched_fragments": 1418,
                "total_fragments": 2101,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Planctomycetales;f__Planctomycetaceae;g__Schlesneria",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.97",
                "min_intra_species_ani": "98.46",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 7,
                "status": "-"
            },
            {
                "accession": "GCA_903858935.1",
                "gtdb_species": "s__Schlesneria sp903858935",
                "ani": 82.0032,
                "matched_fragments": 1387,
                "total_fragments": 2101,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Planctomycetales;f__Planctomycetaceae;g__Schlesneria",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.96",
                "min_intra_species_ani": "99.93",
                "mean_intra_species_af": "0.98",
                "min_intra_species_af": "0.98",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_903899985.1",
                "gtdb_species": "s__Schlesneria sp903899985",
                "ani": 81.5553,
                "matched_fragments": 1316,
                "total_fragments": 2101,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Planctomycetales;f__Planctomycetaceae;g__Schlesneria",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.71",
                "min_intra_species_ani": "99.71",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.95",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_903871875.1",
                "gtdb_species": "s__Schlesneria sp903871875",
                "ani": 76.8818,
                "matched_fragments": 184,
                "total_fragments": 2101,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Planctomycetales;f__Planctomycetaceae;g__Schlesneria",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.94",
                "min_intra_species_ani": "99.93",
                "mean_intra_species_af": "0.97",
                "min_intra_species_af": "0.97",
                "num_clustered_genomes": 4,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": 0.021,
        "cell_length": 0.23,
        "doubling_h": null,
        "growth_tmp": 24.0,
        "optimum_tmp": 20.5,
        "optimum_ph": 4.8,
        "genome_size": 8639329.0,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 1.0,
        "range_salinity": null,
        "facultative_respiration": 1.0,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": 0.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 1.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Planctomycetota",
        "c__Planctomycetia",
        "o__Planctomycetales",
        "f__Planctomycetaceae",
        "g__Schlesneria",
        "s__Schlesneria sp903834925"
    ],
    "_genome_taxon": [
        "uncultured",
        "Schlesneria",
        "sp.",
        "d__Bacteria",
        "p__Planctomycetota",
        "c__Planctomycetia",
        "o__Planctomycetales",
        "f__Planctomycetaceae",
        "g__Schlesneria",
        "s__Schlesneria sp903834925",
        "Bacteria",
        "Planctomycetota",
        "Planctomycetia",
        "Planctomycetales",
        "Planctomycetaceae",
        "Schlesneria",
        "Schlesneria",
        "sp903834925"
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        },
        {
            "id": "MEO_0000024",
            "label": "lake"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}