{
    "type": "genome",
    "identifier": "GCA_903834735.1",
    "organism": "uncultured beta proteobacterium",
    "title": "uncultured beta proteobacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "BILS",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_903834735.1",
        "bioproject": "PRJEB38681",
        "biosample": "SAMEA6952011",
        "wgs_master": "CAILKL000000000.1",
        "refseq_category": "na",
        "taxid": "86027",
        "species_taxid": "86027",
        "organism_name": "uncultured beta proteobacterium",
        "infraspecific_name": "",
        "isolate": "Loclat_bin-19466",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/07/19",
        "asm_name": "freshwater MAG --- Loclat_bin-19466",
        "submitter": "BILS",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/903/834/735/GCA_903834735.1_freshwater_MAG_---_Loclat_bin-19466",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-07-19",
    "dateModified": "2020-07-19",
    "datePublished": "2020-07-19",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured beta proteobacterium"
        ],
        "sample_taxid": [
            "86027"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Switzerland"
        ],
        "sample_host_location_id": [],
        "data_size": "1.045 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 27.6,
        "contamination": 4.17,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3656362",
        "Number of Sequences": "827",
        "Longest Sequences (bp)": "40547",
        "N50 (bp)": "5501",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "59.1",
        "Number of CDSs": "2535",
        "Average Protein Length": "308.5",
        "Coding Ratio (%)": "64.2",
        "Number of rRNAs": "0",
        "Number of tRNAs": "20",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Rhodoferax lacus",
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                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
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            {
                "organism_name": "Rhodoferax saidenbachensis",
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                "relation_to_type": "type",
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                "status": "below_threshold"
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            {
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
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            {
                "organism_name": "Acidovorax facilis",
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                "accession": "GCA_023913775.1",
                "taxid": 12917,
                "species_taxid": 12917,
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                "ani_threshold": 95,
                "status": "below_threshold"
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                "organism_name": "Xylophilus ampelinus",
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                "accession": "GCA_024832295.1",
                "taxid": 54067,
                "species_taxid": 54067,
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                "validated": true,
                "ani": 77.42,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
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                "organism_name": "Acidovorax wautersii",
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                "accession": "GCA_900113035.1",
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                "species_taxid": 1177982,
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                "ani": 77.3142,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Limnohabitans radicicola",
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                "accession": "GCA_014837235.1",
                "taxid": 2771427,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudorhodoferax soli",
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                "accession": "GCA_003337555.1",
                "taxid": 545864,
                "species_taxid": 545864,
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            {
                "organism_name": "Ideonella benzenivorans",
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            },
            {
                "organism_name": "Schlegelella brevitalea",
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                "status": "below_threshold"
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                "mean_intra_species_ani": "N/A",
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                "mean_intra_species_ani": "N/A",
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        ]
    },
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    },
    "_gtdb_taxon": [
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        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
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        "g__Rhodoferax_C",
        "s__"
    ],
    "_genome_taxon": [
        "uncultured",
        "beta",
        "proteobacterium",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Burkholderiales",
        "f__Burkholderiaceae",
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        "s__",
        "Bacteria",
        "Pseudomonadota",
        "Gammaproteobacteria",
        "Burkholderiales",
        "Burkholderiaceae",
        "Rhodoferax",
        "C",
        "s",
        "",
        ""
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        },
        {
            "id": "MEO_0000024",
            "label": "lake"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}