{
    "type": "genome",
    "identifier": "GCA_903839175.1",
    "organism": "uncultured Acidobacteriaceae bacterium",
    "title": "uncultured Acidobacteriaceae bacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "BILS",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_903839175.1",
        "bioproject": "PRJEB38681",
        "biosample": "SAMEA6950695",
        "wgs_master": "CAIMBI000000000.1",
        "refseq_category": "na",
        "taxid": "194844",
        "species_taxid": "194844",
        "organism_name": "uncultured Acidobacteriaceae bacterium",
        "infraspecific_name": "",
        "isolate": "AM-lipid-02-D5_bin-0362",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/07/19",
        "asm_name": "freshwater MAG --- AM-lipid-02-D5_bin-0362",
        "submitter": "BILS",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/903/839/175/GCA_903839175.1_freshwater_MAG_---_AM-lipid-02-D5_bin-0362",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-07-19",
    "dateModified": "2020-07-19",
    "datePublished": "2020-07-19",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Acidobacteriaceae bacterium"
        ],
        "sample_taxid": [
            "194844"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Finland"
        ],
        "sample_host_location_id": [],
        "data_size": "0.846 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": 65.0,
            "max": 65.0
        },
        "completeness": 37.08,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2946712",
        "Number of Sequences": "1132",
        "Longest Sequences (bp)": "9035",
        "N50 (bp)": "2647",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "62.0",
        "Number of CDSs": "1700",
        "Average Protein Length": "254.2",
        "Coding Ratio (%)": "44.0",
        "Number of rRNAs": "0",
        "Number of tRNAs": "14",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 37.08,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_903911925.1",
                "gtdb_species": "s__Terracidiphilus sp903911925",
                "ani": 78.5661,
                "matched_fragments": 134,
                "total_fragments": 302,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Acidobacteriae;o__Acidobacteriales;f__Acidobacteriaceae;g__Terracidiphilus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003134855.1",
                "gtdb_species": "s__Terracidiphilus sp003134855",
                "ani": 78.0693,
                "matched_fragments": 77,
                "total_fragments": 302,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Acidobacteriae;o__Acidobacteriales;f__Acidobacteriaceae;g__Terracidiphilus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003142015.1",
                "gtdb_species": "s__Terracidiphilus sp003142015",
                "ani": 77.6325,
                "matched_fragments": 72,
                "total_fragments": 302,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Acidobacteriae;o__Acidobacteriales;f__Acidobacteriaceae;g__Terracidiphilus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.69",
                "min_intra_species_ani": "99.69",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_003133425.1",
                "gtdb_species": "s__Terracidiphilus sp003133425",
                "ani": 77.2685,
                "matched_fragments": 81,
                "total_fragments": 302,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Acidobacteriae;o__Acidobacteriales;f__Acidobacteriaceae;g__Terracidiphilus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.36",
                "min_intra_species_ani": "99.32",
                "mean_intra_species_af": "0.83",
                "min_intra_species_af": "0.80",
                "num_clustered_genomes": 3,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.219,
        "cell_length": 0.203,
        "doubling_h": 1.138,
        "growth_tmp": 24.739,
        "optimum_tmp": 23.933,
        "optimum_ph": 4.825,
        "genome_size": 5521971.95,
        "gc_content": 60.4,
        "coding_genes": 3773.833,
        "rRNA16S_genes": 1.5,
        "tRNA_genes": 49.0,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.214,
        "range_salinity": null,
        "facultative_respiration": 0.058,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 0.941,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Acidobacteriota",
        "c__Terriglobia",
        "o__Terriglobales",
        "f__Acidobacteriaceae",
        "g__Occallatibacter",
        "s__"
    ],
    "_genome_taxon": [
        "uncultured",
        "Acidobacteriaceae",
        "bacterium",
        "d__Bacteria",
        "p__Acidobacteriota",
        "c__Terriglobia",
        "o__Terriglobales",
        "f__Acidobacteriaceae",
        "g__Occallatibacter",
        "s__",
        "Bacteria",
        "Acidobacteriota",
        "Terriglobia",
        "Terriglobales",
        "Acidobacteriaceae",
        "Occallatibacter",
        "s",
        "",
        ""
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        },
        {
            "id": "MEO_0000024",
            "label": "lake"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}