{
    "type": "genome",
    "identifier": "GCA_903841685.1",
    "organism": "uncultured Actinomycetes bacterium",
    "title": "uncultured Actinomycetes bacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "BILS",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_903841685.1",
        "bioproject": "PRJEB38681",
        "biosample": "SAMEA6950019",
        "wgs_master": "CAIMKC000000000.1",
        "refseq_category": "na",
        "taxid": "152507",
        "species_taxid": "152507",
        "organism_name": "uncultured Actinomycetes bacterium",
        "infraspecific_name": "",
        "isolate": "KT6_bin-826",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/07/16",
        "asm_name": "freshwater MAG --- KT6_bin-826",
        "submitter": "BILS",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/903/841/685/GCA_903841685.1_freshwater_MAG_---_KT6_bin-826",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-07-16",
    "dateModified": "2020-07-16",
    "datePublished": "2020-07-16",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Actinomycetes bacterium"
        ],
        "sample_taxid": [
            "152507"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Sweden"
        ],
        "sample_host_location_id": [],
        "data_size": "0.271 MB",
        "sample_ph_range": {
            "min": 6967.0,
            "max": 6967.0
        },
        "sample_temperature_range": {
            "min": 99.0,
            "max": 99.0
        },
        "completeness": 75.52,
        "contamination": 0.46,
        "strain_heterogeneity": 100.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "938174",
        "Number of Sequences": "303",
        "Longest Sequences (bp)": "12369",
        "N50 (bp)": "3305",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "41.8",
        "Number of CDSs": "691",
        "Average Protein Length": "268.5",
        "Coding Ratio (%)": "59.3",
        "Number of rRNAs": "4",
        "Number of tRNAs": "25",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 75.52,
            "contamination": 0.46,
            "strain_heterogeneity": 100.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_009705675.1",
                "gtdb_species": "s__Nanopelagicus sp009705675",
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                "matched_fragments": 59,
                "total_fragments": 140,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Nanopelagicales;f__Nanopelagicaceae;g__Nanopelagicus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.71",
                "min_intra_species_ani": "98.71",
                "mean_intra_species_af": "0.73",
                "min_intra_species_af": "0.73",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_000378865.1",
                "gtdb_species": "s__Nanopelagicus sp000378865",
                "ani": 82.2889,
                "matched_fragments": 68,
                "total_fragments": 140,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Nanopelagicales;f__Nanopelagicaceae;g__Nanopelagicus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003569185.1",
                "gtdb_species": "s__Nanopelagicus sp003569185",
                "ani": 82.2082,
                "matched_fragments": 70,
                "total_fragments": 140,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Nanopelagicales;f__Nanopelagicaceae;g__Nanopelagicus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016462445.1",
                "gtdb_species": "s__Nanopelagicus sp016462445",
                "ani": 81.8422,
                "matched_fragments": 93,
                "total_fragments": 140,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Nanopelagicales;f__Nanopelagicaceae;g__Nanopelagicus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_002287885.2",
                "gtdb_species": "s__Nanopelagicus limnes",
                "ani": 81.5977,
                "matched_fragments": 89,
                "total_fragments": 140,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Nanopelagicales;f__Nanopelagicaceae;g__Nanopelagicus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_000383815.1",
                "gtdb_species": "s__Nanopelagicus sp000383815",
                "ani": 81.5487,
                "matched_fragments": 61,
                "total_fragments": 140,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Nanopelagicales;f__Nanopelagicaceae;g__Nanopelagicus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_002288305.1",
                "gtdb_species": "s__Nanopelagicus abundans",
                "ani": 81.26,
                "matched_fragments": 89,
                "total_fragments": 140,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Nanopelagicales;f__Nanopelagicaceae;g__Nanopelagicus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_001437855.1",
                "gtdb_species": "s__Nanopelagicus sp001437855",
                "ani": 80.7275,
                "matched_fragments": 53,
                "total_fragments": 140,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Nanopelagicales;f__Nanopelagicaceae;g__Nanopelagicus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.40",
                "min_intra_species_ani": "95.11",
                "mean_intra_species_af": "0.72",
                "min_intra_species_af": "0.67",
                "num_clustered_genomes": 12,
                "status": "-"
            },
            {
                "accession": "GCA_000294575.1",
                "gtdb_species": "s__Nanopelagicus sp000294575",
                "ani": 80.6999,
                "matched_fragments": 76,
                "total_fragments": 140,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Nanopelagicales;f__Nanopelagicaceae;g__Nanopelagicus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.86",
                "min_intra_species_ani": "98.86",
                "mean_intra_species_af": "0.86",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_009691185.1",
                "gtdb_species": "s__Nanopelagicus sp009691185",
                "ani": 80.44,
                "matched_fragments": 71,
                "total_fragments": 140,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Nanopelagicales;f__Nanopelagicaceae;g__Nanopelagicus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_002288005.1",
                "gtdb_species": "s__Nanopelagicus hibericus",
                "ani": 80.3621,
                "matched_fragments": 81,
                "total_fragments": 140,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Nanopelagicales;f__Nanopelagicaceae;g__Nanopelagicus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Actinomycetes",
        "o__Nanopelagicales",
        "f__Nanopelagicaceae",
        "g__Nanopelagicus",
        "s__"
    ],
    "_genome_taxon": [
        "uncultured",
        "Actinomycetes",
        "bacterium",
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Actinomycetes",
        "o__Nanopelagicales",
        "f__Nanopelagicaceae",
        "g__Nanopelagicus",
        "s__",
        "Bacteria",
        "Actinomycetota",
        "Actinomycetes",
        "Nanopelagicales",
        "Nanopelagicaceae",
        "Nanopelagicus",
        "s",
        "",
        ""
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        },
        {
            "id": "MEO_0000024",
            "label": "lake"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}