{ "type": "genome", "identifier": "GCA_903844345.1", "organism": "uncultured Opitutae bacterium", "title": "uncultured Opitutae bacterium", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "BILS", "publication": [ {} ], "properties": { "assembly_accession": "GCA_903844345.1", "bioproject": "PRJEB38681", "biosample": "SAMEA6950348", "wgs_master": "CAIMTF000000000.1", "refseq_category": "na", "taxid": "575426", "species_taxid": "575426", "organism_name": "uncultured Opitutae bacterium", "infraspecific_name": "", "isolate": "KR1_bin-0684", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/07/18", "asm_name": "freshwater MAG --- KR1_bin-0684", "submitter": "BILS", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/903/844/345/GCA_903844345.1_freshwater_MAG_---_KR1_bin-0684", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-07-18", "dateModified": "2020-07-18", "datePublished": "2020-07-18", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Opitutae bacterium" ], "sample_taxid": [ "575426" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Finland" ], "sample_host_location_id": [], "data_size": "0.684 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": 186.0, "max": 186.0 }, "completeness": 100.0, "contamination": 16.67, "strain_heterogeneity": 75.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2414778", "Number of Sequences": "125", "Longest Sequences (bp)": "138782", "N50 (bp)": "44450", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "62.1", "Number of CDSs": "1941", "Average Protein Length": "364.3", "Coding Ratio (%)": "87.8", "Number of rRNAs": "1", "Number of tRNAs": "45", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [], "cc_result": { "completeness": 100.0, "contamination": 16.67, "strain_heterogeneity": 75.0 }, "gtdb_result": [ { "accession": "GCA_903855995.1", "gtdb_species": "s__UBA953 sp903855995", "ani": 99.5181, "matched_fragments": 724, "total_fragments": 739, "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Opitutales;f__UBA953;g__UBA953", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.61", "min_intra_species_ani": "99.32", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.94", "num_clustered_genomes": 20, 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"id": "MEO_0000024", "label": "lake" } ], "quality": 2, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f" }