{ "type": "genome", "identifier": "GCA_903847155.1", "organism": "uncultured Gallionellaceae bacterium", "title": "uncultured Gallionellaceae bacterium", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "BILS", "publication": [ {} ], "properties": { "assembly_accession": "GCA_903847155.1", "bioproject": "PRJEB38681", "biosample": "SAMEA6953683", "wgs_master": "CAINCU000000000.1", "refseq_category": "na", "taxid": "499997", "species_taxid": "499997", "organism_name": "uncultured Gallionellaceae bacterium", "infraspecific_name": "", "isolate": "MJ-time_bin-5145", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/07/19", "asm_name": "freshwater MAG --- MJ-time_bin-5145", "submitter": "BILS", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/903/847/155/GCA_903847155.1_freshwater_MAG_---_MJ-time_bin-5145", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-07-19", "dateModified": "2020-07-19", "datePublished": "2020-07-19", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Gallionellaceae bacterium" ], "sample_taxid": [ "499997" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Finland" ], "sample_host_location_id": [], "data_size": "0.880 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "3080294", "Number of Sequences": "76", "Longest Sequences (bp)": "267204", "N50 (bp)": "72325", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "53.9", "Number of CDSs": "2953", "Average Protein Length": "299.1", "Coding Ratio (%)": "86.0", "Number of rRNAs": "0", "Number of tRNAs": "42", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Ferrigenium kumadai", "strain": "strain=An22", "accession": "GCA_018324385.1", "taxid": 1682490, "species_taxid": 1682490, "relation_to_type": "type", "validated": true, "ani": 79.4195, "matched_fragments": 294, "total_fragments": 991, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ferriphaselus amnicola", "strain": "strain=OYT1", "accession": "GCA_000974685.2", "taxid": 1188319, "species_taxid": 1188319, "relation_to_type": "type", "validated": true, "ani": 77.9986, "matched_fragments": 219, "total_fragments": 991, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfurimicrobium lacus", "strain": "strain=skT11", "accession": "GCA_011764585.1", "taxid": 2715678, "species_taxid": 2715678, "relation_to_type": "type", "validated": true, "ani": 77.1122, "matched_fragments": 137, "total_fragments": 991, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gallionella capsiferriformans", "strain": "strain=ES-2", "accession": "GCA_000145255.1", "taxid": 370405, "species_taxid": 370405, "relation_to_type": "type", "validated": true, "ani": 76.9339, "matched_fragments": 133, "total_fragments": 991, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thiobacillus denitrificans", "strain": "strain=DSM 12475", "accession": "GCA_000376425.1", "taxid": 36861, "species_taxid": 36861, "relation_to_type": "type", "validated": true, "ani": 76.673, "matched_fragments": 102, "total_fragments": 991, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vogesella indigofera", "strain": "strain=DSM 3303", "accession": "GCA_003633895.1", "taxid": 45465, "species_taxid": 45465, "relation_to_type": "type", "validated": true, "ani": 76.6065, "matched_fragments": 87, "total_fragments": 991, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfuriferula plumbiphila", "strain": "strain=Gro7", "accession": "GCA_009938015.1", "taxid": 171865, "species_taxid": 171865, "relation_to_type": "type", "validated": true, "ani": 76.534, "matched_fragments": 100, "total_fragments": 991, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfuriferula multivorans", "strain": "strain=TTN", "accession": "GCA_003851125.1", "taxid": 1559896, "species_taxid": 1559896, "relation_to_type": "type", "validated": true, "ani": 76.4987, "matched_fragments": 90, "total_fragments": 991, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rivicola pingtungensis", "strain": "strain=DSM 29661", "accession": "GCA_003201855.1", "taxid": 1054498, "species_taxid": 1054498, "relation_to_type": "type", "validated": true, "ani": 76.4701, "matched_fragments": 63, "total_fragments": 991, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vogesella fluminis", "strain": "strain=KCTC 23713", "accession": "GCA_014652335.1", "taxid": 1069161, "species_taxid": 1069161, "relation_to_type": "type", "validated": true, "ani": 76.4675, "matched_fragments": 82, "total_fragments": 991, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Herbaspirillum huttiense subsp. putei", "strain": "strain=IAM 15032", "accession": "GCA_000478365.1", "taxid": 230311, "species_taxid": 863372, "relation_to_type": "type", "validated": true, "ani": 76.415, "matched_fragments": 76, "total_fragments": 991, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera butanivorans", "strain": "strain=NBRC 103042", "accession": 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