{
    "type": "genome",
    "identifier": "GCA_903855615.1",
    "organism": "uncultured Cytophagaceae bacterium",
    "title": "uncultured Cytophagaceae bacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "BILS",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_903855615.1",
        "bioproject": "PRJEB38681",
        "biosample": "SAMEA6944792",
        "wgs_master": "CAINZL000000000.1",
        "refseq_category": "na",
        "taxid": "194250",
        "species_taxid": "194250",
        "organism_name": "uncultured Cytophagaceae bacterium",
        "infraspecific_name": "",
        "isolate": "Ki3-D2_bin-1369",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/07/17",
        "asm_name": "freshwater MAG --- Ki3-D2_bin-1369",
        "submitter": "BILS",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/903/855/615/GCA_903855615.1_freshwater_MAG_---_Ki3-D2_bin-1369",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-07-17",
    "dateModified": "2020-07-17",
    "datePublished": "2020-07-17",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Cytophagaceae bacterium"
        ],
        "sample_taxid": [
            "194250"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Sweden"
        ],
        "sample_host_location_id": [],
        "data_size": "0.335 MB",
        "sample_ph_range": {
            "min": 661.0,
            "max": 661.0
        },
        "sample_temperature_range": {
            "min": 79.0,
            "max": 79.0
        },
        "completeness": 31.25,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1153580",
        "Number of Sequences": "465",
        "Longest Sequences (bp)": "7971",
        "N50 (bp)": "2469",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "39.3",
        "Number of CDSs": "611",
        "Average Protein Length": "280.7",
        "Coding Ratio (%)": "44.6",
        "Number of rRNAs": "0",
        "Number of tRNAs": "10",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 31.25,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_005791165.1",
                "gtdb_species": "s__Aquirufa sp005791165",
                "ani": 91.8666,
                "matched_fragments": 100,
                "total_fragments": 102,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Spirosomaceae;g__Aquirufa",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903933935.1",
                "gtdb_species": "s__Aquirufa sp903933935",
                "ani": 91.5459,
                "matched_fragments": 99,
                "total_fragments": 102,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Spirosomaceae;g__Aquirufa",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.55",
                "min_intra_species_ani": "99.55",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.94",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_013205605.1",
                "gtdb_species": "s__Aquirufa sp013205605",
                "ani": 88.2476,
                "matched_fragments": 90,
                "total_fragments": 102,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Spirosomaceae;g__Aquirufa",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.232,
        "cell_length": 0.526,
        "doubling_h": null,
        "growth_tmp": 26.902,
        "optimum_tmp": 26.908,
        "optimum_ph": 7.178,
        "genome_size": 6461989.452,
        "gc_content": 45.029,
        "coding_genes": 5174.515,
        "rRNA16S_genes": 2.888,
        "tRNA_genes": 41.35,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.162,
        "range_salinity": 1.0,
        "facultative_respiration": 0.06,
        "anaerobic_respiration": 0.02,
        "aerobic_respiration": 0.92,
        "mesophilic_range_tmp": 0.875,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.125,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Cytophagales",
        "f__Spirosomataceae",
        "g__Aquirufa",
        "s__Aquirufa sp947471105"
    ],
    "_genome_taxon": [
        "uncultured",
        "Cytophagaceae",
        "bacterium",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Cytophagales",
        "f__Spirosomataceae",
        "g__Aquirufa",
        "s__Aquirufa sp947471105",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Cytophagales",
        "Spirosomataceae",
        "Aquirufa",
        "Aquirufa",
        "sp947471105"
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        },
        {
            "id": "MEO_0000024",
            "label": "lake"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}