{ "type": "genome", "identifier": "GCA_903874205.1", "organism": "Candidatus Staskawiczbacteria bacterium", "title": "Candidatus Staskawiczbacteria bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "BILS", "publication": [ {} ], "properties": { "assembly_accession": "GCA_903874205.1", "bioproject": "PRJEB38681", "biosample": "SAMEA6947122", "wgs_master": "CAIQRL000000000.1", "refseq_category": "na", "taxid": "2053617", "species_taxid": "2053617", "organism_name": "Candidatus Staskawiczbacteria bacterium", "infraspecific_name": "", "isolate": "AM-lipid-01-D7_bin-0066", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/07/16", "asm_name": "freshwater MAG --- AM-lipid-01-D7_bin-0066", "submitter": "BILS", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/903/874/205/GCA_903874205.1_freshwater_MAG_---_AM-lipid-01-D7_bin-0066", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-07-16", "dateModified": "2020-07-16", "datePublished": "2020-07-16", "_annotation": { "sample_count": 1, "sample_organism": [ "Candidatus Staskawiczbacteria bacterium" ], "sample_taxid": [ "2053617" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Finland" ], "sample_host_location_id": [], "data_size": "0.227 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": 51.0, "max": 51.0 }, "completeness": 81.48, "contamination": 4.17, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", 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"num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_903831095.1", "gtdb_species": "s__XYD1-FULL-39-28 sp903831095", "ani": 77.6703, "matched_fragments": 66, "total_fragments": 260, "gtdb_taxonomy": "d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__Paceibacterales;f__Staskawiczbacteraceae;g__XYD1-FULL-39-28", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_903885445.1", "gtdb_species": "s__XYD1-FULL-39-28 sp903885445", "ani": 77.2654, "matched_fragments": 55, "total_fragments": 260, "gtdb_taxonomy": "d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__Paceibacterales;f__Staskawiczbacteraceae;g__XYD1-FULL-39-28", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": null, "cell_length": null, "doubling_h": null, "growth_tmp": null, "optimum_tmp": null, "optimum_ph": null, "genome_size": null, "gc_content": null, "coding_genes": null, "rRNA16S_genes": null, "tRNA_genes": null, "gram_stain": null, "sporulation": null, "motility": null, "range_salinity": null, "facultative_respiration": null, "anaerobic_respiration": null, "aerobic_respiration": null, "mesophilic_range_tmp": null, "thermophilic_range_tmp": null, "psychrophilic_range_tmp": null, "bacillus_cell_shape": null, "coccus_cell_shape": null, "filament_cell_shape": null, "coccobacillus_cell_shape": null, "vibrio_cell_shape": null, "spiral_cell_shape": null }, "_gtdb_taxon": [ "d__Bacteria", "p__Patescibacteria", "c__Paceibacteria", "o__Paceibacterales", "f__Staskawiczbacteraceae", "g__XYD1-FULL-39-28", "s__XYD1-FULL-39-28 sp903835075" ], "_genome_taxon": [ "Candidatus", "Staskawiczbacteria", "bacterium", "d__Bacteria", "p__Patescibacteria", "c__Paceibacteria", "o__Paceibacterales", "f__Staskawiczbacteraceae", "g__XYD1-FULL-39-28", "s__XYD1-FULL-39-28 sp903835075", "Bacteria", "Patescibacteria", "Paceibacteria", "Paceibacterales", "Staskawiczbacteraceae", "XYD1-FULL-39-28", "XYD1-FULL-39-28", "sp903835075" ], "_meo": [ { "id": "MEO_0000038", "label": "freshwater" }, { "id": "MEO_0000024", "label": "lake" } ], "quality": 4, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }