{
    "type": "genome",
    "identifier": "GCA_903883415.1",
    "organism": "uncultured Phycisphaerales bacterium",
    "title": "uncultured Phycisphaerales bacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "BILS",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_903883415.1",
        "bioproject": "PRJEB38681",
        "biosample": "SAMEA6947545",
        "wgs_master": "CAISAX000000000.1",
        "refseq_category": "na",
        "taxid": "904075",
        "species_taxid": "904075",
        "organism_name": "uncultured Phycisphaerales bacterium",
        "infraspecific_name": "",
        "isolate": "AM-lipid-02-D10_bin-0438",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/07/20",
        "asm_name": "freshwater MAG --- AM-lipid-02-D10_bin-0438",
        "submitter": "BILS",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/903/883/415/GCA_903883415.1_freshwater_MAG_---_AM-lipid-02-D10_bin-0438",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-07-20",
    "dateModified": "2020-07-20",
    "datePublished": "2020-07-20",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Phycisphaerales bacterium"
        ],
        "sample_taxid": [
            "904075"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Finland"
        ],
        "sample_host_location_id": [],
        "data_size": "1.859 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": 46.0,
            "max": 46.0
        },
        "completeness": 100.0,
        "contamination": 1.39,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "6525508",
        "Number of Sequences": "205",
        "Longest Sequences (bp)": "245608",
        "N50 (bp)": "60993",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "60.4",
        "Number of CDSs": "5225",
        "Average Protein Length": "355.3",
        "Coding Ratio (%)": "85.4",
        "Number of rRNAs": "2",
        "Number of tRNAs": "52",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Humisphaera borealis",
                "strain": "strain=M1803",
                "accession": "GCA_015169395.1",
                "taxid": 2807512,
                "species_taxid": 2807512,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.172,
                "matched_fragments": 110,
                "total_fragments": 2065,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paludisphaera soli",
                "strain": "strain=JC670",
                "accession": "GCA_011064595.1",
                "taxid": 2712865,
                "species_taxid": 2712865,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.2183,
                "matched_fragments": 57,
                "total_fragments": 2065,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Posidoniimonas corsicana",
                "strain": "strain=KOR34",
                "accession": "GCA_007859765.1",
                "taxid": 1938618,
                "species_taxid": 1938618,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.1839,
                "matched_fragments": 51,
                "total_fragments": 2065,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paludisphaera rhizosphaereae",
                "strain": "strain=JC665",
                "accession": "GCA_011065895.1",
                "taxid": 2711216,
                "species_taxid": 2711216,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.0402,
                "matched_fragments": 59,
                "total_fragments": 2065,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Tautonia plasticadhaerens",
                "strain": "strain=ElP",
                "accession": "GCA_007752535.1",
                "taxid": 2527974,
                "species_taxid": 2527974,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.9885,
                "matched_fragments": 56,
                "total_fragments": 2065,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Nocardia yamanashiensis",
                "strain": "strain=NBRC 100130",
                "accession": "GCA_001613325.1",
                "taxid": 209247,
                "species_taxid": 209247,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.6026,
                "matched_fragments": 65,
                "total_fragments": 2065,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Micromonospora echinaurantiaca",
                "strain": "strain=DSM 43904",
                "accession": "GCA_900090235.1",
                "taxid": 47857,
                "species_taxid": 47857,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.5812,
                "matched_fragments": 65,
                "total_fragments": 2065,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 1.39,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_903871935.1",
                "gtdb_species": "s__CAIQIQ01 sp903871935",
                "ani": 99.9319,
                "matched_fragments": 1933,
                "total_fragments": 2065,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Tepidisphaerales;f__Tepidisphaeraceae;g__CAIQIQ01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.93",
                "min_intra_species_ani": "99.88",
                "mean_intra_species_af": "0.97",
                "min_intra_species_af": "0.95",
                "num_clustered_genomes": 13,
                "status": "conclusive"
            },
            {
                "accession": "GCF_015169395.1",
                "gtdb_species": "s__Humisphaera borealis",
                "ani": 76.1721,
                "matched_fragments": 110,
                "total_fragments": 2065,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Tepidisphaerales;f__Tepidisphaeraceae;g__Humisphaera",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_011367345.1",
                "gtdb_species": "s__DSYW01 sp011367345",
                "ani": 76.1204,
                "matched_fragments": 136,
                "total_fragments": 2065,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Tepidisphaerales;f__Tepidisphaeraceae;g__DSYW01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002311745.1",
                "gtdb_species": "s__UBA1161 sp002311745",
                "ani": 75.7258,
                "matched_fragments": 54,
                "total_fragments": 2065,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Tepidisphaerales;f__Tepidisphaeraceae;g__UBA1161",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002071695.1",
                "gtdb_species": "s__MWDR01 sp002071695",
                "ani": 75.0107,
                "matched_fragments": 66,
                "total_fragments": 2065,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__SM23-33;f__SM23-33;g__MWDR01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_001613325.1",
                "gtdb_species": "s__Nocardia yamanashiensis",
                "ani": 74.6026,
                "matched_fragments": 65,
                "total_fragments": 2065,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Nocardia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": 25.0,
        "optimum_ph": null,
        "genome_size": 3884381.5,
        "gc_content": 72.147,
        "coding_genes": 3146.0,
        "rRNA16S_genes": 1.0,
        "tRNA_genes": 46.0,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 1.0,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": 0.0,
        "coccus_cell_shape": 1.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Planctomycetota",
        "c__Phycisphaerae",
        "o__Tepidisphaerales",
        "f__Tepidisphaeraceae",
        "g__CAIQIQ01",
        "s__CAIQIQ01 sp903871935"
    ],
    "_genome_taxon": [
        "uncultured",
        "Phycisphaerales",
        "bacterium",
        "d__Bacteria",
        "p__Planctomycetota",
        "c__Phycisphaerae",
        "o__Tepidisphaerales",
        "f__Tepidisphaeraceae",
        "g__CAIQIQ01",
        "s__CAIQIQ01 sp903871935",
        "Bacteria",
        "Planctomycetota",
        "Phycisphaerae",
        "Tepidisphaerales",
        "Tepidisphaeraceae",
        "CAIQIQ01",
        "CAIQIQ01",
        "sp903871935"
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        },
        {
            "id": "MEO_0000024",
            "label": "lake"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}