{
    "type": "genome",
    "identifier": "GCA_903894975.1",
    "organism": "uncultured Lentisphaerota bacterium",
    "title": "uncultured Lentisphaerota bacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "BILS",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_903894975.1",
        "bioproject": "PRJEB38681",
        "biosample": "SAMEA6955806",
        "wgs_master": "CAITSE000000000.1",
        "refseq_category": "na",
        "taxid": "278095",
        "species_taxid": "278095",
        "organism_name": "uncultured Lentisphaerota bacterium",
        "infraspecific_name": "",
        "isolate": "AM-2014_bin-3387",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/07/20",
        "asm_name": "freshwater MAG --- AM-2014_bin-3387",
        "submitter": "BILS",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/903/894/975/GCA_903894975.1_freshwater_MAG_---_AM-2014_bin-3387",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-07-20",
    "dateModified": "2020-07-20",
    "datePublished": "2020-07-20",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Lentisphaerota bacterium"
        ],
        "sample_taxid": [
            "278095"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Finland"
        ],
        "sample_host_location_id": [],
        "data_size": "1.250 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 91.67,
        "contamination": 0.38,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "4458213",
        "Number of Sequences": "376",
        "Longest Sequences (bp)": "60058",
        "N50 (bp)": "17901",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "63.4",
        "Number of CDSs": "3305",
        "Average Protein Length": "364.7",
        "Coding Ratio (%)": "81.1",
        "Number of rRNAs": "0",
        "Number of tRNAs": "41",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "accession": "GCA_009695545.1",
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                "species_taxid": 2606640,
                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Victivallis vadensis",
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                "accession": "GCA_003096415.1",
                "taxid": 172901,
                "species_taxid": 172901,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 58,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Luteimonas padinae",
                "strain": "strain=KCTC 52403",
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                "taxid": 1714359,
                "species_taxid": 1714359,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.062,
                "matched_fragments": 51,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Massilia agri",
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                "accession": "GCA_024753255.1",
                "taxid": 1886785,
                "species_taxid": 1886785,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 58,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudomonas aromaticivorans",
                "strain": "strain=MAP12",
                "accession": "GCA_019097855.1",
                "taxid": 2849492,
                "species_taxid": 2849492,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.8965,
                "matched_fragments": 65,
                "total_fragments": 1290,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Arenimonas composti",
                "strain": "strain=DSM 18010",
                "accession": "GCA_000426365.1",
                "taxid": 370776,
                "species_taxid": 370776,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.8956,
                "matched_fragments": 62,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Arenimonas composti",
                "strain": "strain=TR7-09",
                "accession": "GCA_000747175.1",
                "taxid": 370776,
                "species_taxid": 370776,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.879,
                "matched_fragments": 59,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Starkeya novella",
                "strain": "strain=DSM 506",
                "accession": "GCA_000092925.1",
                "taxid": 921,
                "species_taxid": 921,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7308,
                "matched_fragments": 68,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paludisphaera rhizosphaereae",
                "strain": "strain=JC665",
                "accession": "GCA_011065895.1",
                "taxid": 2711216,
                "species_taxid": 2711216,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.6555,
                "matched_fragments": 60,
                "total_fragments": 1290,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 0.38,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
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                "accession": "GCA_903894975.1",
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                "matched_fragments": 1266,
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                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Lentisphaeria;o__UBA1407;f__CAITYL01;g__CAITSE01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_903921725.1",
                "gtdb_species": "s__CAIXRA01 sp903921725",
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                "matched_fragments": 233,
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                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Lentisphaeria;o__UBA1407;f__CAITYL01;g__CAIXRA01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903896595.1",
                "gtdb_species": "s__CAITYL01 sp903896595",
                "ani": 77.4531,
                "matched_fragments": 260,
                "total_fragments": 1290,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Lentisphaeria;o__UBA1407;f__CAITYL01;g__CAITYL01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.89",
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                "num_clustered_genomes": 2,
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            },
            {
                "accession": "GCA_001603055.1",
                "gtdb_species": "s__Lenti-02 sp001603055",
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                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Lentisphaeria;o__UBA1407;f__Lenti-02;g__Lenti-02",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_002068325.1",
                "gtdb_species": "s__MVZH01 sp002068325",
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            },
            {
                "accession": "GCA_003245525.1",
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            },
            {
                "accession": "GCA_903834675.1",
                "gtdb_species": "s__CAILUI01 sp903834675",
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                "num_clustered_genomes": 2,
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            },
            {
                "accession": "GCA_903837355.1",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
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        "p__Verrucomicrobiota",
        "c__Lentisphaeria",
        "o__Oligosphaerales",
        "f__CAITYL01",
        "g__CAITSE01",
        "s__CAITSE01 sp903894975"
    ],
    "_genome_taxon": [
        "uncultured",
        "Lentisphaerota",
        "bacterium",
        "d__Bacteria",
        "p__Verrucomicrobiota",
        "c__Lentisphaeria",
        "o__Oligosphaerales",
        "f__CAITYL01",
        "g__CAITSE01",
        "s__CAITSE01 sp903894975",
        "Bacteria",
        "Verrucomicrobiota",
        "Lentisphaeria",
        "Oligosphaerales",
        "CAITYL01",
        "CAITSE01",
        "CAITSE01",
        "sp903894975"
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        },
        {
            "id": "MEO_0000024",
            "label": "lake"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}