{ "type": "genome", "identifier": "GCA_903896705.1", "organism": "uncultured Opitutae bacterium", "title": "uncultured Opitutae bacterium", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "BILS", "publication": [ {} ], "properties": { "assembly_accession": "GCA_903896705.1", "bioproject": "PRJEB38681", "biosample": "SAMEA6954332", "wgs_master": "CAITYQ000000000.1", "refseq_category": "na", "taxid": "575426", "species_taxid": "575426", "organism_name": "uncultured Opitutae bacterium", "infraspecific_name": "", "isolate": "KTt_bin-0381", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/07/19", "asm_name": "freshwater MAG --- KTt_bin-0381", "submitter": "BILS", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/903/896/705/GCA_903896705.1_freshwater_MAG_---_KTt_bin-0381", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-07-19", "dateModified": "2020-07-19", "datePublished": "2020-07-19", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Opitutae bacterium" ], "sample_taxid": [ "575426" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Sweden" ], "sample_host_location_id": [], "data_size": "0.979 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "3578801", "Number of Sequences": "108", "Longest Sequences (bp)": "143154", "N50 (bp)": "65934", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "69.6", "Number of CDSs": "2873", "Average Protein Length": "369.8", "Coding Ratio (%)": "89.1", "Number of rRNAs": "1", "Number of tRNAs": "41", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Opitutus terrae", "strain": "strain=PB90-1", "accession": "GCA_000019965.1", "taxid": 107709, "species_taxid": 107709, "relation_to_type": "type", "validated": true, "ani": 77.8217, "matched_fragments": 382, "total_fragments": 1135, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cephaloticoccus primus", "strain": "strain=CAG34", "accession": "GCA_001580015.1", "taxid": 1548207, "species_taxid": 1548207, "relation_to_type": "type", "validated": true, "ani": 77.6902, "matched_fragments": 207, "total_fragments": 1135, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rariglobus hedericola", "strain": "strain=53C-WASEF", "accession": "GCA_007559335.1", "taxid": 2597822, "species_taxid": 2597822, "relation_to_type": "type", "validated": true, "ani": 77.6878, "matched_fragments": 225, "total_fragments": 1135, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nibricoccus aquaticus", "strain": "strain=HZ-65", "accession": "GCA_002310495.1", "taxid": 2576891, "species_taxid": 2576891, "relation_to_type": "type", "validated": true, "ani": 77.6774, "matched_fragments": 273, "total_fragments": 1135, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ereboglobus luteus", "strain": "strain=Ho45", "accession": "GCA_003096195.1", "taxid": 1796921, "species_taxid": 1796921, "relation_to_type": "type", "validated": true, "ani": 77.3546, "matched_fragments": 184, "total_fragments": 1135, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Geminisphaera colitermitum", "strain": "strain=TAV2", "accession": "GCA_000171235.2", "taxid": 1148786, "species_taxid": 1148786, "relation_to_type": "type", "validated": true, "ani": 77.0649, "matched_fragments": 183, "total_fragments": 1135, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ruficoccus amylovorans", "strain": "strain=JCM31066", "accession": "GCA_014230085.1", "taxid": 1804625, "species_taxid": 1804625, "relation_to_type": "type", "validated": true, "ani": 76.6631, "matched_fragments": 90, "total_fragments": 1135, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium lacusdiani", "strain": "strain=JXJ CY 35", "accession": "GCA_021916785.1", "taxid": 2895283, "species_taxid": 2895283, "relation_to_type": "type", "validated": true, "ani": 75.0546, "matched_fragments": 67, "total_fragments": 1135, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shinella pollutisoli", 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