{
    "type": "genome",
    "identifier": "GCA_903906105.1",
    "organism": "uncultured Planctomycetota bacterium",
    "title": "uncultured Planctomycetota bacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "BILS",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_903906105.1",
        "bioproject": "PRJEB38681",
        "biosample": "SAMEA6950398",
        "wgs_master": "CAIVIX000000000.1",
        "refseq_category": "na",
        "taxid": "120965",
        "species_taxid": "120965",
        "organism_name": "uncultured Planctomycetota bacterium",
        "infraspecific_name": "",
        "isolate": "LaPlata-5m-b_bin-756",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/07/17",
        "asm_name": "freshwater MAG --- LaPlata-5m-b_bin-756",
        "submitter": "BILS",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/903/906/105/GCA_903906105.1_freshwater_MAG_---_LaPlata-5m-b_bin-756",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-07-17",
    "dateModified": "2020-07-17",
    "datePublished": "2020-07-17",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Planctomycetota bacterium"
        ],
        "sample_taxid": [
            "120965"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Puerto Rico"
        ],
        "sample_host_location_id": [],
        "data_size": "0.527 MB",
        "sample_ph_range": {
            "min": 823.0,
            "max": 823.0
        },
        "sample_temperature_range": {
            "min": 2976.0,
            "max": 2976.0
        },
        "completeness": 70.6,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1965950",
        "Number of Sequences": "704",
        "Longest Sequences (bp)": "12009",
        "N50 (bp)": "3033",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "73.2",
        "Number of CDSs": "1030",
        "Average Protein Length": "309.6",
        "Coding Ratio (%)": "48.7",
        "Number of rRNAs": "0",
        "Number of tRNAs": "30",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Phycisphaera mikurensis",
                "strain": "strain=DSM 103959",
                "accession": "GCA_014207395.1",
                "taxid": 547188,
                "species_taxid": 547188,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.8154,
                "matched_fragments": 60,
                "total_fragments": 262,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Phycisphaera mikurensis",
                "strain": "strain=NBRC 102666",
                "accession": "GCA_000284115.1",
                "taxid": 547188,
                "species_taxid": 547188,
                "relation_to_type": "type",
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                "ani": 75.8154,
                "matched_fragments": 60,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paludisphaera soli",
                "strain": "strain=JC670",
                "accession": "GCA_011064595.1",
                "taxid": 2712865,
                "species_taxid": 2712865,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.2468,
                "matched_fragments": 60,
                "total_fragments": 262,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Agrococcus terreus",
                "strain": "strain=CGMCC 1.6960",
                "accession": "GCA_014645235.1",
                "taxid": 574649,
                "species_taxid": 574649,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.0351,
                "matched_fragments": 72,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Agrococcus jenensis",
                "strain": "strain=DSM 9580",
                "accession": "GCA_003752465.1",
                "taxid": 46353,
                "species_taxid": 46353,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7395,
                "matched_fragments": 69,
                "total_fragments": 262,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 70.6,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
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                "accession": "GCA_016873255.1",
                "gtdb_species": "s__UBA966 sp016873255",
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                "matched_fragments": 214,
                "total_fragments": 262,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Phycisphaerales;f__SM1A02;g__UBA966",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_018883105.1",
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                "ani": 82.7535,
                "matched_fragments": 180,
                "total_fragments": 262,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Phycisphaerales;f__SM1A02;g__UBA966",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903867275.1",
                "gtdb_species": "s__SYAC01 sp903867275",
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                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Phycisphaerales;f__SM1A02;g__SYAC01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016872835.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Phycisphaerales;f__SM1A02;g__SYAC01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_018882625.1",
                "gtdb_species": "s__ZLKRG44 sp018882625",
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                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Phycisphaerales;f__SM1A02;g__ZLKRG44",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_009924765.1",
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_002292895.1",
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                "num_clustered_genomes": 3,
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            },
            {
                "accession": "GCA_016873355.1",
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                "mean_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_016795035.1",
                "gtdb_species": "s__JAEUIT01 sp016795035",
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                "mean_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903918555.1",
                "gtdb_species": "s__QWPT01 sp903918555",
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                "matched_fragments": 74,
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                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Phycisphaerales;f__SM1A02;g__QWPT01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Planctomycetota",
        "c__Phycisphaerae",
        "o__Phycisphaerales",
        "f__SM1A02",
        "g__UBA966",
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    ],
    "_genome_taxon": [
        "uncultured",
        "Planctomycetota",
        "bacterium",
        "d__Bacteria",
        "p__Planctomycetota",
        "c__Phycisphaerae",
        "o__Phycisphaerales",
        "f__SM1A02",
        "g__UBA966",
        "s__",
        "Bacteria",
        "Planctomycetota",
        "Phycisphaerae",
        "Phycisphaerales",
        "SM1A02",
        "UBA966",
        "s",
        "",
        ""
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        },
        {
            "id": "MEO_0000024",
            "label": "lake"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}