{
    "type": "genome",
    "identifier": "GCA_903907945.1",
    "organism": "uncultured Verrucomicrobia subdivision 3 bacterium",
    "title": "uncultured Verrucomicrobia subdivision 3 bacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "BILS",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_903907945.1",
        "bioproject": "PRJEB38681",
        "biosample": "SAMEA6955078",
        "wgs_master": "CAIVQC000000000.1",
        "refseq_category": "na",
        "taxid": "257465",
        "species_taxid": "257465",
        "organism_name": "uncultured Verrucomicrobia subdivision 3 bacterium",
        "infraspecific_name": "",
        "isolate": "VK_bin-1825",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/07/20",
        "asm_name": "freshwater MAG --- VK_bin-1825",
        "submitter": "BILS",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/903/907/945/GCA_903907945.1_freshwater_MAG_---_VK_bin-1825",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-07-20",
    "dateModified": "2020-07-20",
    "datePublished": "2020-07-20",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Verrucomicrobia subdivision 3 bacterium"
        ],
        "sample_taxid": [
            "257465"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Finland"
        ],
        "sample_host_location_id": [],
        "data_size": "1.295 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 84.66,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "4555074",
        "Number of Sequences": "300",
        "Longest Sequences (bp)": "128368",
        "N50 (bp)": "24968",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "55.1",
        "Number of CDSs": "3626",
        "Average Protein Length": "354.5",
        "Coding Ratio (%)": "84.7",
        "Number of rRNAs": "0",
        "Number of tRNAs": "45",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 84.66,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
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                "accession": "GCA_903911825.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Pedosphaerales;f__UBA11358;g__UBA11358",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.63",
                "min_intra_species_ani": "99.63",
                "mean_intra_species_af": "0.91",
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                "num_clustered_genomes": 2,
                "status": "conclusive"
            },
            {
                "accession": "GCA_903827955.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Pedosphaerales;f__UBA11358;g__UBA11358",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.89",
                "min_intra_species_ani": "99.82",
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                "status": "-"
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            {
                "accession": "GCA_903847285.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Pedosphaerales;f__UBA11358;g__UBA11358",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903878805.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Pedosphaerales;f__UBA11358;g__UBA11358",
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                "num_clustered_genomes": 2,
                "status": "-"
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                "accession": "GCA_903833055.1",
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                "status": "-"
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                "mean_intra_species_ani": "N/A",
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            },
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                "accession": "GCA_903944085.1",
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                "accession": "GCA_903872345.1",
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            },
            {
                "accession": "GCA_013140495.1",
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        ]
    },
    "_bac2feature": {
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        "bacillus_cell_shape": null,
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        "vibrio_cell_shape": null,
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    },
    "_gtdb_taxon": [
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        "s__UBA11358 sp903911825"
    ],
    "_genome_taxon": [
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        "subdivision",
        "3",
        "bacterium",
        "d__Bacteria",
        "p__Verrucomicrobiota",
        "c__Verrucomicrobiae",
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        "g__UBA11358",
        "s__UBA11358 sp903911825",
        "Bacteria",
        "Verrucomicrobiota",
        "Verrucomicrobiae",
        "Limisphaerales",
        "UBA11358",
        "UBA11358",
        "UBA11358",
        "sp903911825"
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        },
        {
            "id": "MEO_0000024",
            "label": "lake"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}