{
    "type": "genome",
    "identifier": "GCA_903913105.1",
    "organism": "uncultured Gemmatimonadota bacterium",
    "title": "uncultured Gemmatimonadota bacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "BILS",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_903913105.1",
        "bioproject": "PRJEB38681",
        "biosample": "SAMEA6950427",
        "wgs_master": "CAIWJV000000000.1",
        "refseq_category": "na",
        "taxid": "203437",
        "species_taxid": "203437",
        "organism_name": "uncultured Gemmatimonadota bacterium",
        "infraspecific_name": "",
        "isolate": "Ki2-D1_bin-0520",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/07/19",
        "asm_name": "freshwater MAG --- Ki2-D1_bin-0520",
        "submitter": "BILS",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/903/913/105/GCA_903913105.1_freshwater_MAG_---_Ki2-D1_bin-0520",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-07-19",
    "dateModified": "2020-07-19",
    "datePublished": "2020-07-19",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Gemmatimonadota bacterium"
        ],
        "sample_taxid": [
            "203437"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Sweden"
        ],
        "sample_host_location_id": [],
        "data_size": "0.857 MB",
        "sample_ph_range": {
            "min": 572.0,
            "max": 572.0
        },
        "sample_temperature_range": {
            "min": 201.0,
            "max": 201.0
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3060595",
        "Number of Sequences": "18",
        "Longest Sequences (bp)": "642674",
        "N50 (bp)": "308350",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "63.9",
        "Number of CDSs": "2641",
        "Average Protein Length": "360.5",
        "Coding Ratio (%)": "93.3",
        "Number of rRNAs": "2",
        "Number of tRNAs": "48",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Gemmatimonas aurantiaca",
                "strain": "strain=T-27",
                "accession": "GCA_000010305.1",
                "taxid": 173480,
                "species_taxid": 173480,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.2631,
                "matched_fragments": 103,
                "total_fragments": 1010,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Gemmatimonas groenlandica",
                "strain": "strain=TET16",
                "accession": "GCA_013004105.1",
                "taxid": 2732249,
                "species_taxid": 2732249,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 129,
                "total_fragments": 1010,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Gemmatimonas phototrophica",
                "strain": "strain=AP64",
                "accession": "GCA_000695095.2",
                "taxid": 1379270,
                "species_taxid": 1379270,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.7363,
                "matched_fragments": 110,
                "total_fragments": 1010,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Gemmatirosa kalamazoonensis",
                "strain": "strain=KBS708",
                "accession": "GCA_000522985.1",
                "taxid": 861299,
                "species_taxid": 861299,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.327,
                "matched_fragments": 194,
                "total_fragments": 1010,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Longimicrobium terrae",
                "strain": "strain=CB-286315",
                "accession": "GCA_013000925.1",
                "taxid": 1639882,
                "species_taxid": 1639882,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.4889,
                "matched_fragments": 64,
                "total_fragments": 1010,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Longimicrobium terrae",
                "strain": "strain=DSM 29007",
                "accession": "GCA_014202995.1",
                "taxid": 1639882,
                "species_taxid": 1639882,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.2236,
                "matched_fragments": 61,
                "total_fragments": 1010,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
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                "accession": "GCA_903882745.1",
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.53",
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                "status": "conclusive"
            },
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                "status": "-"
            },
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                "accession": "GCA_016218305.1",
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                "mean_intra_species_ani": "N/A",
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_003171215.1",
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                "matched_fragments": 238,
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            {
                "accession": "GCA_017881585.1",
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                "mean_intra_species_ani": "N/A",
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            {
                "accession": "GCA_016874035.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__Fen-1231",
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_016182795.1",
                "gtdb_species": "s__PNKL01 sp016182795",
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                "mean_intra_species_ani": "N/A",
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            },
            {
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                "accession": "GCA_016789705.1",
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
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        "genome_size": null,
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        "coding_genes": null,
        "rRNA16S_genes": null,
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        "gram_stain": null,
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        "mesophilic_range_tmp": null,
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        "bacillus_cell_shape": null,
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    },
    "_gtdb_taxon": [
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        "f__Gemmatimonadaceae",
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    ],
    "_genome_taxon": [
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        "d__Bacteria",
        "p__Gemmatimonadota",
        "c__Gemmatimonadetes",
        "o__Gemmatimonadales",
        "f__Gemmatimonadaceae",
        "g__Fen-1231",
        "s__Fen-1231 sp903882745",
        "Bacteria",
        "Gemmatimonadota",
        "Gemmatimonadetes",
        "Gemmatimonadales",
        "Gemmatimonadaceae",
        "Fen-1231",
        "Fen-1231",
        "sp903882745"
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        },
        {
            "id": "MEO_0000024",
            "label": "lake"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}