{
    "type": "genome",
    "identifier": "GCA_903933015.1",
    "organism": "uncultured Spartobacteria bacterium",
    "title": "uncultured Spartobacteria bacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "BILS",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_903933015.1",
        "bioproject": "PRJEB38681",
        "biosample": "SAMEA6943548",
        "wgs_master": "CAIZIQ000000000.1",
        "refseq_category": "na",
        "taxid": "333969",
        "species_taxid": "333969",
        "organism_name": "uncultured Spartobacteria bacterium",
        "infraspecific_name": "",
        "isolate": "C-2_bin-400",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/07/18",
        "asm_name": "freshwater MAG --- C-2_bin-400",
        "submitter": "BILS",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/903/933/015/GCA_903933015.1_freshwater_MAG_---_C-2_bin-400",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-07-18",
    "dateModified": "2020-07-18",
    "datePublished": "2020-07-18",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Spartobacteria bacterium"
        ],
        "sample_taxid": [
            "333969"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Canada"
        ],
        "sample_host_location_id": [],
        "data_size": "0.669 MB",
        "sample_ph_range": {
            "min": 487.0,
            "max": 487.0
        },
        "sample_temperature_range": {
            "min": 119.0,
            "max": 119.0
        },
        "completeness": 100.0,
        "contamination": 4.63,
        "strain_heterogeneity": 50.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2332821",
        "Number of Sequences": "335",
        "Longest Sequences (bp)": "55112",
        "N50 (bp)": "11495",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "56.7",
        "Number of CDSs": "1851",
        "Average Protein Length": "317.5",
        "Coding Ratio (%)": "75.6",
        "Number of rRNAs": "1",
        "Number of tRNAs": "42",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Terrimicrobium sacchariphilum",
                "strain": "strain=NM-5",
                "accession": "GCA_001613545.1",
                "taxid": 690879,
                "species_taxid": 690879,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.4392,
                "matched_fragments": 64,
                "total_fragments": 586,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 4.63,
            "strain_heterogeneity": 50.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_903933015.1",
                "gtdb_species": "s__UBA6821 sp903933015",
                "ani": 100.0,
                "matched_fragments": 582,
                "total_fragments": 586,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Chthoniobacterales;f__UBA6821;g__UBA6821",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_903831635.1",
                "gtdb_species": "s__UBA6821 sp903831635",
                "ani": 80.1284,
                "matched_fragments": 195,
                "total_fragments": 586,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Chthoniobacterales;f__UBA6821;g__UBA6821",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903868795.1",
                "gtdb_species": "s__UBA6821 sp903868795",
                "ani": 79.7806,
                "matched_fragments": 252,
                "total_fragments": 586,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Chthoniobacterales;f__UBA6821;g__UBA6821",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.82",
                "min_intra_species_ani": "99.76",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.94",
                "num_clustered_genomes": 6,
                "status": "-"
            },
            {
                "accession": "GCA_009928265.1",
                "gtdb_species": "s__UBA6821 sp009928265",
                "ani": 78.7992,
                "matched_fragments": 199,
                "total_fragments": 586,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Chthoniobacterales;f__UBA6821;g__UBA6821",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903919105.1",
                "gtdb_species": "s__UBA6821 sp903919105",
                "ani": 78.6589,
                "matched_fragments": 138,
                "total_fragments": 586,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Chthoniobacterales;f__UBA6821;g__UBA6821",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903858595.1",
                "gtdb_species": "s__UBA6821 sp903858595",
                "ani": 78.5654,
                "matched_fragments": 227,
                "total_fragments": 586,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Chthoniobacterales;f__UBA6821;g__UBA6821",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.57",
                "min_intra_species_ani": "99.57",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_903847935.1",
                "gtdb_species": "s__UBA6821 sp903847935",
                "ani": 77.8189,
                "matched_fragments": 170,
                "total_fragments": 586,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Chthoniobacterales;f__UBA6821;g__UBA6821",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.83",
                "min_intra_species_ani": "99.83",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.94",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_003136515.1",
                "gtdb_species": "s__UBA6821 sp003136515",
                "ani": 76.6389,
                "matched_fragments": 83,
                "total_fragments": 586,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Chthoniobacterales;f__UBA6821;g__UBA6821",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Verrucomicrobiota",
        "c__Verrucomicrobiae",
        "o__Chthoniobacterales",
        "f__UBA6821",
        "g__UBA6821",
        "s__UBA6821 sp903933015"
    ],
    "_genome_taxon": [
        "uncultured",
        "Spartobacteria",
        "bacterium",
        "d__Bacteria",
        "p__Verrucomicrobiota",
        "c__Verrucomicrobiae",
        "o__Chthoniobacterales",
        "f__UBA6821",
        "g__UBA6821",
        "s__UBA6821 sp903933015",
        "Bacteria",
        "Verrucomicrobiota",
        "Verrucomicrobiae",
        "Chthoniobacterales",
        "UBA6821",
        "UBA6821",
        "UBA6821",
        "sp903933015"
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        },
        {
            "id": "MEO_0000027",
            "label": "pond"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}