<?xml version="1.0" ?>
<BioSampleSet><BioSample submission_date="2020-06-16T16:20:10.483" last_update="2020-06-17T17:13:14.503" publication_date="2020-06-17T17:13:14.503" access="public" id="15259733" accession="SAMEA6948119">   <Ids>     <Id db="BioSample">SAMEA6948119</Id>     <Id db="BILS" db_label="Sample name">Loc090907-1m_bin-040</Id>     <Id db="SRA" is_primary="1">ERS4658000</Id>   </Ids>   <Description>     <Title>MAG Loc090907-1m_bin-040 from assembly ERS4600498</Title>     <Organism taxonomy_id="91750" taxonomy_name="uncultured Alphaproteobacteria bacterium"/>   </Description>   <Owner>     <Name abbreviation="EBI">European Bioinformatics Institute</Name>     <Contacts>       <Contact lab="European Nucleotide Archive"/>     </Contacts>   </Owner>   <Models>     <Model>Generic</Model>   </Models>   <Package display_name="Generic">Generic.1.0</Package>   <Attributes>     <Attribute attribute_name="sequencing method">NovaSeq</Attribute>     <Attribute attribute_name="assembly software">megahit</Attribute>     <Attribute attribute_name="completeness software">checkm</Attribute>     <Attribute attribute_name="binning software">metabat</Attribute>     <Attribute attribute_name="assembly quality">Many fragments with little to no review of assembly other than reporting of standard assembly statistics</Attribute>     <Attribute attribute_name="investigation type" harmonized_name="investigation_type" display_name="investigation type">metagenome</Attribute>     <Attribute attribute_name="binning parameters">min_len:1500,min_bin_size:10000,maxP:93,minS:50</Attribute>     <Attribute attribute_name="taxonomic identity marker">gtdbtk followed by sourmash-lca, see publication</Attribute>     <Attribute attribute_name="isolation_source" harmonized_name="isolation_source" display_name="isolation source">freshwater</Attribute>     <Attribute attribute_name="metagenomic source">freshwater metagenome</Attribute>     <Attribute attribute_name="completeness score" unit="%">95.73</Attribute>     <Attribute attribute_name="contamination score" unit="%">4.52</Attribute>     <Attribute attribute_name="gtdb_taxonomy">d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__UBA1997;g__UBA2645</Attribute>     <Attribute attribute_name="metagenomic OTU">anoxic_mOTU_0860</Attribute>     <Attribute attribute_name="sample derived from">ERS4600498</Attribute>     <Attribute attribute_name="site name">Loclat</Attribute>     <Attribute attribute_name="Lake_code">Loclat</Attribute>     <Attribute attribute_name="geographic location (country and/or sea)" harmonized_name="geo_loc_name" display_name="geographic location">Switzerland</Attribute>     <Attribute attribute_name="region">Neuchâtel</Attribute>     <Attribute attribute_name="environment (biome)" harmonized_name="env_broad_scale" display_name="broad-scale environmental context">lentic water body</Attribute>     <Attribute attribute_name="environment (feature)" harmonized_name="env_local_scale" display_name="local-scale environmental context">lake</Attribute>     <Attribute attribute_name="environment (material)" harmonized_name="env_medium" display_name="environmental medium">water</Attribute>     <Attribute attribute_name="geographic location (depth)" unit="m">1</Attribute>     <Attribute attribute_name="oxygen" unit="mg/L" harmonized_name="oxygen" display_name="oxygen">7.64999312666394</Attribute>     <Attribute attribute_name="ph" harmonized_name="ph" display_name="pH">8</Attribute>     <Attribute attribute_name="temperature" unit="ºC" harmonized_name="temp" display_name="temperature">19.9</Attribute>     <Attribute attribute_name="conductivity." unit="mS/cm">0.362</Attribute>     <Attribute attribute_name="collection date" harmonized_name="collection_date" display_name="collection date">2009-09-07</Attribute>     <Attribute attribute_name="nitrate" unit="µmol/L" harmonized_name="nitrate" display_name="nitrate">0.01612775764496</Attribute>     <Attribute attribute_name="sulfate" unit="mg/L" harmonized_name="sulfate" display_name="sulfate">141.2</Attribute>     <Attribute attribute_name="Fluoride" unit="mg/L">n.a.</Attribute>     <Attribute attribute_name="Chloride" unit="mg/L" harmonized_name="chloride" display_name="chloride">257.2</Attribute>     <Attribute attribute_name="sample owner">Stefan Bertilsson</Attribute>     <Attribute attribute_name="geographic location (longitude)" unit="DD">47.01861111111111</Attribute>     <Attribute attribute_name="geographic location (latitude)" unit="DD">6.996666666666667</Attribute>     <Attribute attribute_name="project name" harmonized_name="project_name" display_name="project name">microbes in stratified freshwaters</Attribute>     <Attribute attribute_name="collection data">metagenome</Attribute>     <Attribute attribute_name="water environmental package">water</Attribute>     <Attribute attribute_name="ENA-FIRST-PUBLIC">2020-06-15</Attribute>     <Attribute attribute_name="ENA-LAST-UPDATE">2020-06-12</Attribute>   </Attributes>   <Status status="live" when="2020-06-17T17:13:14.503"/> </BioSample> </BioSampleSet>
