{ "type": "genome", "identifier": "GCA_903941265.1", "organism": "uncultured Burkholderiales bacterium", "title": "uncultured Burkholderiales bacterium", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "BILS", "publication": [ {} ], "properties": { "assembly_accession": "GCA_903941265.1", "bioproject": "PRJEB38681", "biosample": "SAMEA6948131", "wgs_master": "CAJAOD000000000.1", "refseq_category": "na", "taxid": "208544", "species_taxid": "208544", "organism_name": "uncultured Burkholderiales bacterium", "infraspecific_name": "", "isolate": "Loc090907-1m_bin-287", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/07/17", "asm_name": "freshwater MAG --- Loc090907-1m_bin-287", "submitter": "BILS", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/903/941/265/GCA_903941265.1_freshwater_MAG_---_Loc090907-1m_bin-287", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-07-17", "dateModified": "2020-07-17", "datePublished": "2020-07-17", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Burkholderiales bacterium" ], "sample_taxid": [ "208544" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Switzerland" ], "sample_host_location_id": [], "data_size": "0.370 MB", "sample_ph_range": { "min": 8.0, "max": 8.0 }, "sample_temperature_range": { "min": 199.0, "max": 199.0 }, "completeness": 50.09, "contamination": 6.25, "strain_heterogeneity": 100.0, "genome_count": 1 }, 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"num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_903961095.1", "gtdb_species": "s__Limnohabitans_A sp903961095", "ani": 83.3658, "matched_fragments": 128, "total_fragments": 160, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Limnohabitans_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.26", "min_intra_species_ani": "99.25", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.84", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_003063375.1", "gtdb_species": "s__Limnohabitans_A sp003063375", "ani": 82.8346, "matched_fragments": 128, "total_fragments": 160, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Limnohabitans_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", 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"aerobic_respiration": 0.88, "mesophilic_range_tmp": 0.982, "thermophilic_range_tmp": 0.0, "psychrophilic_range_tmp": 0.017, "bacillus_cell_shape": 0.893, "coccus_cell_shape": 0.035, "filament_cell_shape": 0.003, "coccobacillus_cell_shape": 0.031, "vibrio_cell_shape": 0.021, "spiral_cell_shape": 0.014 }, "_gtdb_taxon": [ "d__Bacteria", "p__Pseudomonadota", "c__Gammaproteobacteria", "o__Burkholderiales", "f__Burkholderiaceae", "g__Limnohabitans_A", "s__Limnohabitans_A sp021300495" ], "_genome_taxon": [ "uncultured", "Burkholderiales", "bacterium", "d__Bacteria", "p__Pseudomonadota", "c__Gammaproteobacteria", "o__Burkholderiales", "f__Burkholderiaceae", "g__Limnohabitans_A", "s__Limnohabitans_A sp021300495", "Bacteria", "Pseudomonadota", "Gammaproteobacteria", "Burkholderiales", "Burkholderiaceae", "Limnohabitans", "A", "Limnohabitans", "A", "sp021300495" ], "_meo": [ { "id": "MEO_0000038", "label": "freshwater" }, { "id": "MEO_0000024", "label": "lake" } ], "quality": 2, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f" }