{ "type": "genome", "identifier": "GCA_903944085.1", "organism": "uncultured Verrucomicrobia subdivision 3 bacterium", "title": "uncultured Verrucomicrobia subdivision 3 bacterium", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "BILS", "publication": [ {} ], "properties": { "assembly_accession": "GCA_903944085.1", "bioproject": "PRJEB38681", "biosample": "SAMEA6949518", "wgs_master": "CAJAQO000000000.1", "refseq_category": "na", "taxid": "257465", "species_taxid": "257465", "organism_name": "uncultured Verrucomicrobia subdivision 3 bacterium", "infraspecific_name": "", "isolate": "B-2_bin-237", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/07/20", "asm_name": "freshwater MAG --- B-2_bin-237", "submitter": "BILS", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/903/944/085/GCA_903944085.1_freshwater_MAG_---_B-2_bin-237", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-07-20", "dateModified": "2020-07-20", "datePublished": "2020-07-20", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Verrucomicrobia subdivision 3 bacterium" ], "sample_taxid": [ "257465" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Canada" ], "sample_host_location_id": [], "data_size": "1.628 MB", "sample_ph_range": { "min": 457.0, "max": 457.0 }, "sample_temperature_range": { "min": 99.0, "max": 99.0 }, "completeness": 95.83, "contamination": 2.08, "strain_heterogeneity": 100.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "5792836", "Number of Sequences": "335", "Longest Sequences (bp)": "126552", "N50 (bp)": "28940", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "57.4", "Number of CDSs": "4330", "Average Protein Length": "359.6", "Coding Ratio (%)": "80.6", "Number of rRNAs": "2", "Number of tRNAs": "50", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Ereboglobus luteus", "strain": "strain=Ho45", "accession": "GCA_003096195.1", "taxid": 1796921, "species_taxid": 1796921, "relation_to_type": "type", "validated": true, "ani": 75.7162, "matched_fragments": 52, "total_fragments": 1750, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium crusticola", "strain": "strain=KCTC 52305", "accession": "GCA_022179145.1", "taxid": 1697972, "species_taxid": 1697972, "relation_to_type": "type", "validated": true, "ani": 74.7567, 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