{ "type": "genome", "identifier": "GCA_903952025.1", "organism": "uncultured Actinomycetes bacterium", "title": "uncultured Actinomycetes bacterium", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "BILS", "publication": [ {} ], "properties": { "assembly_accession": "GCA_903952025.1", "bioproject": "PRJEB38681", "biosample": "SAMEA6945452", "wgs_master": "CAJBEM000000000.1", "refseq_category": "na", "taxid": "152507", "species_taxid": "152507", "organism_name": "uncultured Actinomycetes bacterium", "infraspecific_name": "", "isolate": "Loc090721-7m_bin-398", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/07/18", "asm_name": "freshwater MAG --- Loc090721-7m_bin-398", "submitter": "BILS", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/903/952/025/GCA_903952025.1_freshwater_MAG_---_Loc090721-7m_bin-398", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-07-18", "dateModified": "2020-07-18", "datePublished": "2020-07-18", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Actinomycetes bacterium" ], "sample_taxid": [ "152507" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Switzerland" ], "sample_host_location_id": [], "data_size": "0.586 MB", "sample_ph_range": { "min": 732.0, "max": 732.0 }, "sample_temperature_range": { "min": 102.0, "max": 102.0 }, "completeness": 68.51, "contamination": 6.02, "strain_heterogeneity": 80.0, "genome_count": 1 }, 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"matched_fragments": 172, "total_fragments": 267, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium vinylchloridicum", "strain": "strain=CECT 8761", "accession": "GCA_013404075.1", "taxid": 2736928, "species_taxid": 2736928, "relation_to_type": "type", "validated": true, "ani": 79.2535, "matched_fragments": 165, "total_fragments": 267, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium rhodesiae", "strain": "strain=DSM 44223", "accession": "GCA_002086695.1", "taxid": 36814, "species_taxid": 36814, "relation_to_type": "type", "validated": true, "ani": 79.2533, "matched_fragments": 154, "total_fragments": 267, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium crocinum", "strain": "strain=JCM 16369", "accession": "GCA_022370635.3", "taxid": 388459, "species_taxid": 388459, "relation_to_type": "type", "validated": true, "ani": 79.174, "matched_fragments": 158, "total_fragments": 267, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium pallens", "strain": "strain=JCM 16370", "accession": "GCA_019456675.1", "taxid": 370524, "species_taxid": 370524, "relation_to_type": "type", "validated": true, "ani": 79.1202, "matched_fragments": 155, "total_fragments": 267, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium sphagni", "strain": "strain=ATCC 33027", "accession": "GCA_002250655.1", "taxid": 1786, "species_taxid": 1786, "relation_to_type": "type", "validated": true, "ani": 78.8626, "matched_fragments": 145, "total_fragments": 267, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium sarraceniae", "strain": "strain=JCM 30395", "accession": "GCA_010731875.1", "taxid": 1534348, "species_taxid": 1534348, "relation_to_type": "type", "validated": true, "ani": 78.847, "matched_fragments": 136, "total_fragments": 267, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium helvum", "strain": "strain=JCM 30396", "accession": "GCA_010731895.1", "taxid": 1534349, "species_taxid": 1534349, "relation_to_type": "type", "validated": true, "ani": 78.6091, "matched_fragments": 154, "total_fragments": 267, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium avium subsp. avium", "strain": "strain=ATCC 25291", "accession": "GCA_000174035.1", "taxid": 44454, "species_taxid": 1764, "relation_to_type": "type", "validated": true, "ani": 78.5821, "matched_fragments": 113, "total_fragments": 267, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium avium subsp. avium", "strain": "strain=DSM 44156", "accession": "GCA_009741445.1", "taxid": 44454, "species_taxid": 1764, "relation_to_type": "type", "validated": true, "ani": 78.577, "matched_fragments": 116, "total_fragments": 267, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium chlorophenolicum", "strain": "strain=NBRC 15527", "accession": "GCA_001552315.1", "taxid": 37916, "species_taxid": 37916, "relation_to_type": "type", "validated": true, "ani": 78.469, "matched_fragments": 141, "total_fragments": 267, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium intracellulare subsp. chimaera", "strain": "strain=JCM_14737", "accession": "GCA_001938095.1", "taxid": 222805, "species_taxid": 1767, "relation_to_type": "type", "validated": true, "ani": 78.2144, "matched_fragments": 120, "total_fragments": 267, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium intracellulare subsp. chimaera", "strain": "strain=DSM 44623", "accession": "GCA_002101575.1", "taxid": 222805, "species_taxid": 1767, "relation_to_type": "type", "validated": true, "ani": 78.2144, "matched_fragments": 120, "total_fragments": 267, "ani_threshold": 95, "status": "below_threshold" }, { 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