{ "type": "genome", "identifier": "GCA_903953405.1", "organism": "uncultured bacterium", "title": "uncultured bacterium", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "BILS", "publication": [ {} ], "properties": { "assembly_accession": "GCA_903953405.1", "bioproject": "PRJEB38681", "biosample": "SAMEA6951287", "wgs_master": "CAJBJN000000000.1", "refseq_category": "na", "taxid": "77133", "species_taxid": "77133", "organism_name": "uncultured bacterium", "infraspecific_name": "", "isolate": "Loc081215-1m_bin-1698", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/07/18", "asm_name": "freshwater MAG --- Loc081215-1m_bin-1698", "submitter": "BILS", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/903/953/405/GCA_903953405.1_freshwater_MAG_---_Loc081215-1m_bin-1698", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-07-18", "dateModified": "2020-07-18", "datePublished": "2020-07-18", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured bacterium" ], "sample_taxid": [ "77133" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Switzerland" ], "sample_host_location_id": [], "data_size": "0.722 MB", "sample_ph_range": { "min": 78.0, "max": 78.0 }, "sample_temperature_range": { "min": 44.0, "max": 44.0 }, "completeness": 95.83, "contamination": 4.63, "strain_heterogeneity": 100.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2608416", "Number of Sequences": "581", "Longest Sequences (bp)": "24855", "N50 (bp)": "5544", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "67.6", "Number of CDSs": "2046", "Average Protein Length": "292.2", "Coding Ratio (%)": "68.8", "Number of rRNAs": "1", "Number of tRNAs": "42", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Motilibacter deserti", "strain": "strain=E257", "accession": "GCA_011250635.1", "taxid": 2714956, "species_taxid": 2714956, "relation_to_type": "type", "validated": true, "ani": 77.4482, "matched_fragments": 103, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Motilibacter aurantiacus", "strain": "strain=K478", "accession": "GCA_011250645.1", "taxid": 2714955, "species_taxid": 2714955, "relation_to_type": "type", "validated": true, "ani": 77.1382, "matched_fragments": 111, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides jishulii", "strain": "strain=dk3136", "accession": "GCA_006007965.1", "taxid": 2575440, "species_taxid": 2575440, "relation_to_type": "type", "validated": true, "ani": 77.0691, "matched_fragments": 81, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Kineococcus vitellinus", "strain": "strain=T13", "accession": "GCA_009906315.1", "taxid": 2696565, "species_taxid": 2696565, "relation_to_type": "type", "validated": true, "ani": 77.0147, "matched_fragments": 89, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides seonyuensis", "strain": "strain=MMS17-SY207-3", "accession": "GCA_004683965.1", "taxid": 2518371, "species_taxid": 2518371, "relation_to_type": "type", "validated": true, "ani": 77.0089, "matched_fragments": 91, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces apocyni", "strain": "strain=TRM 66233", "accession": "GCA_009739465.1", "taxid": 2654677, "species_taxid": 2654677, "relation_to_type": "type", "validated": true, "ani": 76.9402, "matched_fragments": 68, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides lacusdianchii", "strain": "strain=JXJ CY 38", "accession": "GCA_020102855.1", "taxid": 2783664, "species_taxid": 2783664, "relation_to_type": "type", "validated": true, "ani": 76.9269, "matched_fragments": 110, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces mobaraensis", "strain": "strain=DSM 40847", "accession": "GCA_017916255.1", "taxid": 35621, "species_taxid": 35621, "relation_to_type": "type", "validated": true, "ani": 76.9088, "matched_fragments": 94, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides ganghwensis", "strain": "strain=9920", "accession": "GCA_014779655.1", "taxid": 252230, "species_taxid": 252230, "relation_to_type": "type", "validated": true, "ani": 76.8573, "matched_fragments": 105, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces mobaraensis", "strain": "strain=DSM 40847", "accession": "GCA_000342125.1", "taxid": 35621, "species_taxid": 35621, "relation_to_type": "type", "validated": true, "ani": 76.8524, "matched_fragments": 95, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Jiangella rhizosphaerae", "strain": "strain=NEAU-YY265", "accession": "GCA_003579925.1", "taxid": 2293569, "species_taxid": 2293569, "relation_to_type": "type", "validated": true, "ani": 76.8479, "matched_fragments": 93, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nonomuraea coxensis", "strain": "strain=DSM 45129", "accession": "GCA_019397265.1", "taxid": 404386, "species_taxid": 404386, "relation_to_type": "type", "validated": true, "ani": 76.8474, "matched_fragments": 115, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides gansuensis", "strain": "strain=WSJ-1", "accession": "GCA_003076135.1", "taxid": 2138300, "species_taxid": 2138300, "relation_to_type": "type", "validated": true, "ani": 76.8474, "matched_fragments": 109, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura viridis", "strain": "strain=DSM 43175", "accession": "GCA_015751755.1", "taxid": 58110, "species_taxid": 58110, "relation_to_type": "type", "validated": true, "ani": 76.8287, "matched_fragments": 78, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides okcheonensis", "strain": "strain=MMS20-HV4-12", "accession": "GCA_020991065.1", "taxid": 2894081, "species_taxid": 2894081, "relation_to_type": "type", "validated": true, "ani": 76.7655, "matched_fragments": 111, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nonomuraea coxensis", "strain": "strain=DSM 45129", "accession": "GCA_000379885.1", "taxid": 404386, "species_taxid": 404386, "relation_to_type": "type", "validated": true, "ani": 76.7165, "matched_fragments": 115, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides furvisabuli", "strain": "strain=JCM 13813", "accession": "GCA_021083185.1", "taxid": 375542, "species_taxid": 375542, "relation_to_type": "type", "validated": true, "ani": 76.6753, "matched_fragments": 108, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphaerisporangium corydalis", "strain": "strain=NEAU-YHS15", "accession": "GCA_025506355.1", "taxid": 1441875, "species_taxid": 1441875, "relation_to_type": "type", "validated": true, "ani": 76.668, "matched_fragments": 102, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nonomuraea lactucae", "strain": "strain=NEAU-YG30", "accession": "GCA_003313395.1", "taxid": 2249762, "species_taxid": 2249762, "relation_to_type": "type", "validated": true, "ani": 76.6617, "matched_fragments": 100, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nonomuraea muscovyensis", "strain": "strain=DSM 45913", "accession": "GCA_014207745.1", "taxid": 1124761, "species_taxid": 1124761, "relation_to_type": "type", "validated": true, "ani": 76.6548, "matched_fragments": 118, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces agglutinans", "strain": "strain=CFH 90414", "accession": "GCA_009647605.1", "taxid": 2662258, "species_taxid": 2662258, "relation_to_type": "type", "validated": true, "ani": 76.6424, "matched_fragments": 59, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces mashuensis", "strain": "strain=JCM 4059", "accession": "GCA_014654785.1", "taxid": 33904, "species_taxid": 33904, "relation_to_type": "type", "validated": true, "ani": 76.6306, "matched_fragments": 109, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Kitasatospora acidiphila", "strain": "strain=MMS16-CNU292", "accession": "GCA_006636205.1", "taxid": 2567942, "species_taxid": 2567942, "relation_to_type": "type", "validated": true, "ani": 76.6111, "matched_fragments": 97, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura coerulea", "strain": "strain=DSM 43675", "accession": "GCA_014208105.1", "taxid": 46159, "species_taxid": 46159, "relation_to_type": "type", "validated": true, "ani": 76.6073, "matched_fragments": 89, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Jiangella aurantiaca", "strain": "strain=8K307", "accession": "GCA_004349105.1", "taxid": 2530373, "species_taxid": 2530373, "relation_to_type": "type", "validated": true, "ani": 76.5766, "matched_fragments": 89, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Jiangella mangrovi", "strain": "strain=DSM 102122", "accession": "GCA_014204975.1", "taxid": 1524084, "species_taxid": 1524084, "relation_to_type": "type", "validated": true, "ani": 76.5536, "matched_fragments": 111, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Jiangella alba", "strain": "strain=DSM 45237", "accession": "GCA_900106035.1", "taxid": 561176, "species_taxid": 561176, "relation_to_type": "type", "validated": true, "ani": 76.5249, "matched_fragments": 101, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Jiangella muralis", "strain": "strain=DSM 45357", "accession": "GCA_001270745.1", "taxid": 702383, "species_taxid": 702383, "relation_to_type": "type", "validated": true, "ani": 76.5237, "matched_fragments": 94, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cellulomonas persica", "strain": "strain=NBRC 101101", "accession": "GCA_007989825.1", "taxid": 76861, "species_taxid": 76861, "relation_to_type": "type", "validated": true, "ani": 76.5036, "matched_fragments": 77, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Jiangella ureilytica", "strain": "strain=KC603", "accession": "GCA_004348545.1", "taxid": 2530374, "species_taxid": 2530374, "relation_to_type": "type", "validated": true, "ani": 76.4924, "matched_fragments": 114, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura coerulea", "strain": "strain=JCM 3320", "accession": "GCA_014648535.1", "taxid": 46159, "species_taxid": 46159, "relation_to_type": "type", "validated": true, "ani": 76.4784, "matched_fragments": 89, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinotalea solisilvae", "strain": "strain=KACC 19191", "accession": "GCA_016464425.1", "taxid": 2072922, "species_taxid": 2072922, "relation_to_type": "type", "validated": true, "ani": 76.4712, "matched_fragments": 96, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Isoptericola jiangsuensis", "strain": "strain=DSM 21863", "accession": "GCA_002563715.1", "taxid": 548579, "species_taxid": 548579, "relation_to_type": "type", "validated": true, "ani": 76.4377, "matched_fragments": 82, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura bangladeshensis", "strain": "strain=DSM 45347", "accession": "GCA_004348335.1", "taxid": 453573, "species_taxid": 453573, "relation_to_type": "type", "validated": true, "ani": 76.4236, "matched_fragments": 82, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Kitasatospora humi", "strain": "strain=RB6PN24", "accession": "GCA_020907985.1", "taxid": 2893891, "species_taxid": 2893891, "relation_to_type": "type", "validated": true, "ani": 76.3994, "matched_fragments": 103, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura decatromicini", "strain": "strain=CYP1-5", "accession": "GCA_008121305.1", "taxid": 2604572, "species_taxid": 2604572, "relation_to_type": "type", "validated": true, "ani": 76.22, "matched_fragments": 90, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura citrea", "strain": "strain=DSM 43461", "accession": "GCA_013409045.1", "taxid": 46158, "species_taxid": 46158, "relation_to_type": "type", "validated": true, "ani": 76.2124, "matched_fragments": 98, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura mexicana", "strain": "strain=DSM 44485", "accession": "GCA_900188105.1", "taxid": 134959, "species_taxid": 134959, "relation_to_type": "type", "validated": true, "ani": 76.1837, "matched_fragments": 93, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura namibiensis", "strain": "strain=DSM 44197", "accession": "GCA_014138665.1", "taxid": 182080, "species_taxid": 182080, "relation_to_type": "type", "validated": true, "ani": 76.1712, "matched_fragments": 104, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 95.83, "contamination": 4.63, "strain_heterogeneity": 100.0 }, "gtdb_result": [ { "accession": "GCA_903954205.1", "gtdb_species": "s__Mxb001 sp903954205", "ani": 98.5033, "matched_fragments": 388, "total_fragments": 544, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Nanopelagicales;f__S36-B12;g__Mxb001", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.46", "min_intra_species_ani": "98.20", "mean_intra_species_af": "0.79", "min_intra_species_af": "0.70", "num_clustered_genomes": 14, "status": "conclusive" }, { "accession": "GCA_016870425.1", "gtdb_species": "s__Mxb001 sp016870425", "ani": 82.1258, "matched_fragments": 344, "total_fragments": 544, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Nanopelagicales;f__S36-B12;g__Mxb001", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_004379115.1", "gtdb_species": "s__Mxb001 sp004379115", "ani": 80.2593, "matched_fragments": 273, "total_fragments": 544, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Nanopelagicales;f__S36-B12;g__Mxb001", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_903848435.1", "gtdb_species": "s__Mxb001 sp903848435", "ani": 79.4997, "matched_fragments": 206, "total_fragments": 544, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Nanopelagicales;f__S36-B12;g__Mxb001", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.93", "min_intra_species_ani": "95.89", "mean_intra_species_af": "0.80", "min_intra_species_af": "0.74", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCA_016870515.1", "gtdb_species": "s__Mxb001 sp016870515", "ani": 79.4851, "matched_fragments": 281, "total_fragments": 544, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Nanopelagicales;f__S36-B12;g__Mxb001", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_903909555.1", "gtdb_species": "s__Mxb001 sp903909555", "ani": 79.1532, "matched_fragments": 243, "total_fragments": 544, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Nanopelagicales;f__S36-B12;g__Mxb001", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.15", "min_intra_species_ani": "99.05", "mean_intra_species_af": "0.83", "min_intra_species_af": "0.81", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCA_903934925.1", "gtdb_species": "s__UBA10649 sp903934925", "ani": 78.2541, "matched_fragments": 122, "total_fragments": 544, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Nanopelagicales;f__S36-B12;g__UBA10649", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.42", "min_intra_species_ani": "99.35", "mean_intra_species_af": "0.85", "min_intra_species_af": "0.83", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCA_016125355.1", "gtdb_species": "s__UBA10649 sp016125355", "ani": 77.9357, "matched_fragments": 147, "total_fragments": 544, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Nanopelagicales;f__S36-B12;g__UBA10649", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_017856385.1", "gtdb_species": "s__UBA10649 sp017856385", "ani": 77.8513, "matched_fragments": 142, "total_fragments": 544, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Nanopelagicales;f__S36-B12;g__UBA10649", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016717115.1", "gtdb_species": "s__UBA10649 sp016717115", "ani": 77.8302, "matched_fragments": 154, "total_fragments": 544, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Nanopelagicales;f__S36-B12;g__UBA10649", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_015390235.1", "gtdb_species": "s__Quadrisphaera sp015390235", "ani": 76.9967, "matched_fragments": 83, "total_fragments": 544, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Quadrisphaeraceae;g__Quadrisphaera", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_017916455.1", "gtdb_species": "s__Nocardioides sp017916455", "ani": 76.8742, "matched_fragments": 90, "total_fragments": 544, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.92", "min_intra_species_ani": "98.92", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.96", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_014208105.1", "gtdb_species": "s__Spirillospora coerulea", "ani": 76.5604, "matched_fragments": 91, "total_fragments": 544, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptosporangiales;f__Streptosporangiaceae;g__Spirillospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_004349105.1", "gtdb_species": "s__Jiangella aurantiaca", "ani": 76.5522, "matched_fragments": 90, "total_fragments": 544, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Jiangellales;f__Jiangellaceae;g__Jiangella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004348335.1", "gtdb_species": "s__Spirillospora bangladeshensis", "ani": 76.3785, "matched_fragments": 84, "total_fragments": 544, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptosporangiales;f__Streptosporangiaceae;g__Spirillospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900659615.1", "gtdb_species": "s__Spirillospora fibrosa", "ani": 76.2467, "matched_fragments": 90, "total_fragments": 544, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptosporangiales;f__Streptosporangiaceae;g__Spirillospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": null, "cell_length": null, "doubling_h": null, "growth_tmp": null, "optimum_tmp": null, "optimum_ph": null, "genome_size": null, "gc_content": null, "coding_genes": null, "rRNA16S_genes": null, "tRNA_genes": null, "gram_stain": null, "sporulation": null, "motility": null, "range_salinity": null, "facultative_respiration": null, "anaerobic_respiration": null, "aerobic_respiration": null, "mesophilic_range_tmp": null, "thermophilic_range_tmp": null, "psychrophilic_range_tmp": null, "bacillus_cell_shape": null, "coccus_cell_shape": null, "filament_cell_shape": null, "coccobacillus_cell_shape": null, "vibrio_cell_shape": null, "spiral_cell_shape": null }, "_gtdb_taxon": [ "d__Bacteria", "p__Actinomycetota", "c__Actinomycetes", "o__S36-B12", "f__S36-B12", "g__Mxb001", "s__Mxb001 sp903954205" ], "_genome_taxon": [ "uncultured", "bacterium", "d__Bacteria", "p__Actinomycetota", "c__Actinomycetes", "o__S36-B12", "f__S36-B12", "g__Mxb001", "s__Mxb001 sp903954205", "Bacteria", "Actinomycetota", "Actinomycetes", "S36-B12", "S36-B12", "Mxb001", "Mxb001", "sp903954205" ], "_meo": [ { "id": "MEO_0000038", "label": "freshwater" }, { "id": "MEO_0000024", "label": "lake" } ], "quality": 3, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }