{
    "type": "genome",
    "identifier": "GCA_903995045.1",
    "organism": "uncultured Actinomycetes bacterium",
    "title": "uncultured Actinomycetes bacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "BILS",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_903995045.1",
        "bioproject": "PRJEB38681",
        "biosample": "SAMEA7110413",
        "wgs_master": "CAJEZN000000000.1",
        "refseq_category": "na",
        "taxid": "152507",
        "species_taxid": "152507",
        "organism_name": "uncultured Actinomycetes bacterium",
        "infraspecific_name": "",
        "isolate": "SB-2103-994-D19",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/08/12",
        "asm_name": "freshwater SAG --- SB-2103-994-D19",
        "submitter": "BILS",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/903/995/045/GCA_903995045.1_freshwater_SAG_---_SB-2103-994-D19",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-08-12",
    "dateModified": "2020-08-12",
    "datePublished": "2020-08-12",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Actinomycetes bacterium"
        ],
        "sample_taxid": [
            "152507"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Finland"
        ],
        "sample_host_location_id": [],
        "data_size": "0.186 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": 125.0,
            "max": 125.0
        },
        "completeness": 41.15,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "639634",
        "Number of Sequences": "105",
        "Longest Sequences (bp)": "37324",
        "N50 (bp)": "12091",
        "Gap Ratio (%)": "0.031268",
        "GCcontent (%)": "49.8",
        "Number of CDSs": "544",
        "Average Protein Length": "294.2",
        "Coding Ratio (%)": "75.1",
        "Number of rRNAs": "2",
        "Number of tRNAs": "18",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 41.15,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_903899375.1",
                "gtdb_species": "s__PALSA-747 sp903899375",
                "ani": 98.1169,
                "matched_fragments": 108,
                "total_fragments": 156,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Nanopelagicales;f__Nanopelagicaceae;g__PALSA-747",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.46",
                "min_intra_species_ani": "99.00",
                "mean_intra_species_af": "0.86",
                "min_intra_species_af": "0.79",
                "num_clustered_genomes": 59,
                "status": "conclusive"
            },
            {
                "accession": "GCA_903827345.1",
                "gtdb_species": "s__PALSA-747 sp903827345",
                "ani": 88.7005,
                "matched_fragments": 89,
                "total_fragments": 156,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Nanopelagicales;f__Nanopelagicaceae;g__PALSA-747",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.69",
                "min_intra_species_ani": "97.69",
                "mean_intra_species_af": "0.77",
                "min_intra_species_af": "0.77",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_903867285.1",
                "gtdb_species": "s__PALSA-747 sp903867285",
                "ani": 84.1552,
                "matched_fragments": 77,
                "total_fragments": 156,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Nanopelagicales;f__Nanopelagicaceae;g__PALSA-747",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.56",
                "min_intra_species_ani": "98.05",
                "mean_intra_species_af": "0.76",
                "min_intra_species_af": "0.69",
                "num_clustered_genomes": 12,
                "status": "-"
            },
            {
                "accession": "GCA_903933585.1",
                "gtdb_species": "s__PALSA-747 sp903933585",
                "ani": 83.4331,
                "matched_fragments": 98,
                "total_fragments": 156,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Nanopelagicales;f__Nanopelagicaceae;g__PALSA-747",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.42",
                "min_intra_species_ani": "99.37",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_903891755.1",
                "gtdb_species": "s__PALSA-747 sp903891755",
                "ani": 79.4582,
                "matched_fragments": 50,
                "total_fragments": 156,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Nanopelagicales;f__Nanopelagicaceae;g__PALSA-747",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.94",
                "min_intra_species_ani": "98.90",
                "mean_intra_species_af": "0.76",
                "min_intra_species_af": "0.73",
                "num_clustered_genomes": 3,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Actinomycetes",
        "o__Nanopelagicales",
        "f__Nanopelagicaceae",
        "g__PALSA-747",
        "s__PALSA-747 sp903899375"
    ],
    "_genome_taxon": [
        "uncultured",
        "Actinomycetes",
        "bacterium",
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Actinomycetes",
        "o__Nanopelagicales",
        "f__Nanopelagicaceae",
        "g__PALSA-747",
        "s__PALSA-747 sp903899375",
        "Bacteria",
        "Actinomycetota",
        "Actinomycetes",
        "Nanopelagicales",
        "Nanopelagicaceae",
        "PALSA-747",
        "PALSA-747",
        "sp903899375"
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}