{
    "type": "genome",
    "identifier": "GCA_904501885.1",
    "organism": "uncultured Acetatifactor sp.",
    "title": "uncultured Acetatifactor sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "Shanghai MasScience Genomics Core",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_904501885.1",
        "bioproject": "PRJEB40266",
        "biosample": "SAMEA7322053",
        "wgs_master": "CAJGCP000000000.1",
        "refseq_category": "na",
        "taxid": "1671927",
        "species_taxid": "1671927",
        "organism_name": "uncultured Acetatifactor sp.",
        "infraspecific_name": "",
        "isolate": "MAG34",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/10/12",
        "asm_name": "MAG34",
        "submitter": "Shanghai MasScience Genomics Core",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/904/501/885/GCA_904501885.1_MAG34",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-10-12",
    "dateModified": "2020-10-12",
    "datePublished": "2020-10-12",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Acetatifactor sp."
        ],
        "sample_taxid": [
            "1671927"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China"
        ],
        "sample_host_location_id": [],
        "data_size": "0.587 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 93.75,
        "contamination": 0.38,
        "strain_heterogeneity": 100.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2044524",
        "Number of Sequences": "65",
        "Longest Sequences (bp)": "114275",
        "N50 (bp)": "50724",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "44.0",
        "Number of CDSs": "1799",
        "Average Protein Length": "334.0",
        "Coding Ratio (%)": "88.2",
        "Number of rRNAs": "0",
        "Number of tRNAs": "33",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Acetatifactor muris",
                "strain": "strain=DSM 23669",
                "accession": "GCA_024623325.1",
                "taxid": 879566,
                "species_taxid": 879566,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.9914,
                "matched_fragments": 67,
                "total_fragments": 648,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Eisenbergiella massiliensis",
                "strain": "strain=AT11",
                "accession": "GCA_900243045.1",
                "taxid": 1720294,
                "species_taxid": 1720294,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.5854,
                "matched_fragments": 50,
                "total_fragments": 648,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 93.75,
            "contamination": 0.38,
            "strain_heterogeneity": 100.0
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        "gtdb_result": [
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                "accession": "GCA_904501885.1",
                "gtdb_species": "s__Acetatifactor sp904501885",
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                "matched_fragments": 646,
                "total_fragments": 648,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Acetatifactor",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "100.00",
                "min_intra_species_ani": "100.00",
                "mean_intra_species_af": "1.00",
                "min_intra_species_af": "1.00",
                "num_clustered_genomes": 2,
                "status": "conclusive"
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                "gtdb_species": "s__Acetatifactor sp017397645",
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                "matched_fragments": 366,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Acetatifactor",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
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            {
                "accession": "GCA_015056885.1",
                "gtdb_species": "s__Acetatifactor sp015056885",
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                "matched_fragments": 93,
                "total_fragments": 648,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Acetatifactor",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016293615.1",
                "gtdb_species": "s__Acetatifactor sp016293615",
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                "matched_fragments": 72,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Acetatifactor",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016303085.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Acetatifactor",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
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            {
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "status": "-"
            },
            {
                "accession": "GCA_003584705.1",
                "gtdb_species": "s__Acetatifactor sp900066565",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Acetatifactor",
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                "mean_intra_species_ani": "98.01",
                "min_intra_species_ani": "97.56",
                "mean_intra_species_af": "0.88",
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                "num_clustered_genomes": 26,
                "status": "-"
            },
            {
                "accession": "GCA_017465845.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Acetatifactor",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003447295.1",
                "gtdb_species": "s__Acetatifactor sp003447295",
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                "matched_fragments": 60,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Acetatifactor",
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                "mean_intra_species_ani": "97.04",
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                "num_clustered_genomes": 4,
                "status": "-"
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            {
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                "gtdb_species": "s__Acetatifactor sp900772845",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Acetatifactor",
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                "mean_intra_species_ani": "95.92",
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                "mean_intra_species_af": "0.80",
                "min_intra_species_af": "0.80",
                "num_clustered_genomes": 2,
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            {
                "accession": "GCA_900771995.1",
                "gtdb_species": "s__Acetatifactor sp900771995",
                "ani": 77.0733,
                "matched_fragments": 84,
                "total_fragments": 648,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Acetatifactor",
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                "mean_intra_species_ani": "N/A",
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            {
                "accession": "GCA_910584435.1",
                "gtdb_species": "s__Acetatifactor sp910584435",
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                "matched_fragments": 57,
                "total_fragments": 648,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Acetatifactor",
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            {
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": 37.0,
        "optimum_tmp": null,
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        "genome_size": null,
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        "rRNA16S_genes": null,
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        "gram_stain": null,
        "sporulation": null,
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        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
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        "mesophilic_range_tmp": null,
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        "bacillus_cell_shape": null,
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        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
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        "p__Bacillota_A",
        "c__Clostridia",
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        "g__Acetatifactor",
        "s__Acetatifactor sp904501885"
    ],
    "_genome_taxon": [
        "uncultured",
        "Acetatifactor",
        "sp.",
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Lachnospirales",
        "f__Lachnospiraceae",
        "g__Acetatifactor",
        "s__Acetatifactor sp904501885",
        "Bacteria",
        "Bacillota",
        "A",
        "Clostridia",
        "Lachnospirales",
        "Lachnospiraceae",
        "Acetatifactor",
        "Acetatifactor",
        "sp904501885"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}