{
    "type": "genome",
    "identifier": "GCA_905182285.1",
    "organism": "uncultured Amylibacter sp.",
    "title": "uncultured Amylibacter sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_905182285.1",
        "bioproject": "PRJEB41592",
        "biosample": "SAMEA7768548",
        "wgs_master": "CAJJAY000000000.1",
        "refseq_category": "na",
        "taxid": "1617807",
        "species_taxid": "1617807",
        "organism_name": "uncultured Amylibacter sp.",
        "infraspecific_name": "",
        "isolate": "FRAM18_bin021",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/02/03",
        "asm_name": "FRAM18_bin021",
        "submitter": "MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/905/182/285/GCA_905182285.1_FRAM18_bin021",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-02-03",
    "dateModified": "2021-02-03",
    "datePublished": "2021-02-03",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Amylibacter sp."
        ],
        "sample_taxid": [
            "1617807"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [],
        "sample_host_location_id": [],
        "data_size": "0.541 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 90.28,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1903131",
        "Number of Sequences": "56",
        "Longest Sequences (bp)": "272908",
        "N50 (bp)": "64569",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "36.0",
        "Number of CDSs": "1808",
        "Average Protein Length": "317.8",
        "Coding Ratio (%)": "90.6",
        "Number of rRNAs": "1",
        "Number of tRNAs": "26",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 90.28,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_905182285.1",
                "gtdb_species": "s__Amylibacter sp905182285",
                "ani": 100.0,
                "matched_fragments": 604,
                "total_fragments": 606,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Amylibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.59",
                "min_intra_species_ani": "99.59",
                "mean_intra_species_af": "0.86",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 2,
                "status": "conclusive"
            },
            {
                "accession": "GCA_000153745.1",
                "gtdb_species": "s__Amylibacter sp000153745",
                "ani": 81.3354,
                "matched_fragments": 463,
                "total_fragments": 606,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Amylibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.38",
                "min_intra_species_ani": "97.19",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 11,
                "status": "-"
            },
            {
                "accession": "GCA_900197625.1",
                "gtdb_species": "s__Amylibacter sp900197625",
                "ani": 80.8128,
                "matched_fragments": 417,
                "total_fragments": 606,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Amylibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.40",
                "min_intra_species_ani": "99.20",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.94",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_905181935.1",
                "gtdb_species": "s__Amylibacter sp905181935",
                "ani": 78.1506,
                "matched_fragments": 229,
                "total_fragments": 606,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Amylibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Alphaproteobacteria",
        "o__Rhodobacterales",
        "f__Rhodobacteraceae",
        "g__Amylibacter",
        "s__Amylibacter sp905182285"
    ],
    "_genome_taxon": [
        "uncultured",
        "Amylibacter",
        "sp.",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Alphaproteobacteria",
        "o__Rhodobacterales",
        "f__Rhodobacteraceae",
        "g__Amylibacter",
        "s__Amylibacter sp905182285",
        "Bacteria",
        "Pseudomonadota",
        "Alphaproteobacteria",
        "Rhodobacterales",
        "Rhodobacteraceae",
        "Amylibacter",
        "Amylibacter",
        "sp905182285"
    ],
    "_meo": [
        {
            "id": "MEO_0000041",
            "label": "marine water"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}