{
    "type": "genome",
    "identifier": "GCA_905199095.1",
    "organism": "uncultured Prevotellaceae bacterium",
    "title": "uncultured Prevotellaceae bacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "EMG",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_905199095.1",
        "bioproject": "PRJEB37358",
        "biosample": "SAMEA7846550",
        "wgs_master": "CAJKFH000000000.1",
        "refseq_category": "na",
        "taxid": "370804",
        "species_taxid": "370804",
        "organism_name": "uncultured Prevotellaceae bacterium",
        "infraspecific_name": "",
        "isolate": "ERR1305892-bin.20",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/02/04",
        "asm_name": "ERR1305892-mag-bin.20",
        "submitter": "EMG",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/905/199/095/GCA_905199095.1_ERR1305892-mag-bin.20",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-02-04",
    "dateModified": "2021-02-04",
    "datePublished": "2021-02-04",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Prevotellaceae bacterium"
        ],
        "sample_taxid": [
            "370804"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Denmark"
        ],
        "sample_host_location_id": [],
        "data_size": "0.790 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 77.78,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2739149",
        "Number of Sequences": "276",
        "Longest Sequences (bp)": "41965",
        "N50 (bp)": "14360",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "45.2",
        "Number of CDSs": "1894",
        "Average Protein Length": "386.1",
        "Coding Ratio (%)": "80.1",
        "Number of rRNAs": "0",
        "Number of tRNAs": "15",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Prevotella copri",
                "strain": "strain=DSM 18205",
                "accession": "GCA_009495405.1",
                "taxid": 165179,
                "species_taxid": 165179,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 76.9396,
                "matched_fragments": 74,
                "total_fragments": 775,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella copri",
                "strain": "strain=DSM 18205",
                "accession": "GCA_025151535.1",
                "taxid": 165179,
                "species_taxid": 165179,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 76.9158,
                "matched_fragments": 75,
                "total_fragments": 775,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella copri",
                "strain": "strain=DSM 18205",
                "accession": "GCA_000157935.1",
                "taxid": 165179,
                "species_taxid": 165179,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 76.9105,
                "matched_fragments": 75,
                "total_fragments": 775,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Palleniella intestinalis",
                "strain": "strain=PINT",
                "accession": "GCA_013166595.1",
                "taxid": 2736291,
                "species_taxid": 2736291,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.4426,
                "matched_fragments": 65,
                "total_fragments": 775,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella stercorea",
                "strain": "strain=DSM 18206",
                "accession": "GCA_000235885.1",
                "taxid": 363265,
                "species_taxid": 363265,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 76.2752,
                "matched_fragments": 64,
                "total_fragments": 775,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella pectinovora",
                "strain": "strain=P4-76",
                "accession": "GCA_000834015.1",
                "taxid": 1602169,
                "species_taxid": 1602169,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.0469,
                "matched_fragments": 74,
                "total_fragments": 775,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 77.78,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_900548195.1",
                "gtdb_species": "s__Prevotella sp900548195",
                "ani": 95.3494,
                "matched_fragments": 602,
                "total_fragments": 775,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.71",
                "min_intra_species_ani": "95.27",
                "mean_intra_species_af": "0.80",
                "min_intra_species_af": "0.75",
                "num_clustered_genomes": 7,
                "status": "conclusive"
            },
            {
                "accession": "GCA_900552965.1",
                "gtdb_species": "s__Prevotella sp900552965",
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                "matched_fragments": 454,
                "total_fragments": 775,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.78",
                "min_intra_species_ani": "99.78",
                "mean_intra_species_af": "0.83",
                "min_intra_species_af": "0.83",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_900769275.1",
                "gtdb_species": "s__Prevotella sp900769275",
                "ani": 78.2907,
                "matched_fragments": 212,
                "total_fragments": 775,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002317355.1",
                "gtdb_species": "s__Prevotella sp002317355",
                "ani": 78.2738,
                "matched_fragments": 171,
                "total_fragments": 775,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900315105.1",
                "gtdb_species": "s__Prevotella sp900315105",
                "ani": 78.1646,
                "matched_fragments": 170,
                "total_fragments": 775,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.64",
                "min_intra_species_ani": "97.28",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_902801155.1",
                "gtdb_species": "s__Prevotella sp902801155",
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                "matched_fragments": 140,
                "total_fragments": 775,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.39",
                "min_intra_species_ani": "96.09",
                "mean_intra_species_af": "0.81",
                "min_intra_species_af": "0.73",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_902798615.1",
                "gtdb_species": "s__Prevotella sp902798615",
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                "matched_fragments": 168,
                "total_fragments": 775,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.97",
                "min_intra_species_ani": "96.95",
                "mean_intra_species_af": "0.86",
                "min_intra_species_af": "0.84",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_902801425.1",
                "gtdb_species": "s__Prevotella sp902801425",
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                "matched_fragments": 151,
                "total_fragments": 775,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.61",
                "min_intra_species_ani": "96.51",
                "mean_intra_species_af": "0.78",
                "min_intra_species_af": "0.78",
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                "status": "-"
            },
            {
                "accession": "GCA_017478025.1",
                "gtdb_species": "s__Prevotella sp017478025",
                "ani": 76.4749,
                "matched_fragments": 57,
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.24",
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                "mean_intra_species_af": "0.74",
                "min_intra_species_af": "0.74",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_002297965.1",
                "gtdb_species": "s__Prevotella sp002297965",
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                "mean_intra_species_ani": "99.14",
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                "mean_intra_species_af": "0.78",
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                "num_clustered_genomes": 2,
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            },
            {
                "accession": "GCF_000687715.1",
                "gtdb_species": "s__Prevotella ruminicola_B",
                "ani": 76.131,
                "matched_fragments": 51,
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002394385.1",
                "gtdb_species": "s__Prevotella sp002394385",
                "ani": 75.7893,
                "matched_fragments": 58,
                "total_fragments": 775,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella",
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                "mean_intra_species_ani": "97.28",
                "min_intra_species_ani": "97.06",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 9,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.225,
        "cell_length": 0.118,
        "doubling_h": null,
        "growth_tmp": 36.775,
        "optimum_tmp": 35.358,
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        "genome_size": 3057162.545,
        "gc_content": 45.298,
        "coding_genes": 2508.172,
        "rRNA16S_genes": 4.0,
        "tRNA_genes": 50.875,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.976,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.023,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
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    "_gtdb_taxon": [
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        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Bacteroidaceae",
        "g__Prevotella",
        "s__Prevotella sp900548195"
    ],
    "_genome_taxon": [
        "uncultured",
        "Prevotellaceae",
        "bacterium",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Bacteroidaceae",
        "g__Prevotella",
        "s__Prevotella sp900548195",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Bacteroidales",
        "Bacteroidaceae",
        "Prevotella",
        "Prevotella",
        "sp900548195"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}