# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_3	LOCUS_00030	sequence01:1676..1813(-)	partial			WP_010966740.1	helix-turn-helix transcriptional regulator	88.9	11.6	62.5
MGA_10	LOCUS_00100	sequence01:7725..8252(-)	partial			WP_012545391.1	DUF177 domain-containing protein	74.9	84.3	31.0
MGA_50	LOCUS_00500	sequence01:46504..47466(-)	partial			WP_011861272.1	ABC transporter permease	59.7	28.3	31.8
MGA_51	LOCUS_00510	sequence01:47444..47938(-)	partial			WP_011015830.1	NUDIX domain-containing protein	89.0	56.3	56.8
MGA_65	LOCUS_00650	sequence01:64122..64994(-)	partial			WP_005812149.1	amidohydrolase family protein	88.3	67.9	32.1
MGA_86	LOCUS_00860	sequence01:86080..87240(-)	partial			WP_011073855.1	flagellin lysine-N-methylase	30.3	31.4	32.5
MGA_103	LOCUS_01030	sequence01:102776..103423(+)	partial			WP_010946906.1	Dot/Icm type IV secretion system effector LidL	82.3	35.8	39.5
MGA_106	LOCUS_01060	sequence01:104701..105552(-)	partial			WP_011860860.1	sensor histidine kinase	96.8	65.5	27.2
MGA_107	LOCUS_01070	sequence01:105549..107069(-)	partial			WP_010887814.1	MoxR family ATPase	43.7	61.8	27.2
MGA_111	LOCUS_01110	sequence01:110321..111103(-)	frameshift,internal_stop_codon	110306..110308(-)	110335	WP_011948299.1	extracellular solute-binding protein	96.5	40.9	47.8
MGA_131	LOCUS_01310	sequence01:132513..134780(-)	partial			WP_003438236.1	adenosylcobalamin-dependent ribonucleoside-diphosphate reductase	74.0	77.6	60.1
MGA_136	LOCUS_01360	sequence01:139363..140664(-)	partial			WP_033261187.1	DUF4173 domain-containing protein	56.8	47.0	24.3
MGA_143	LOCUS_01430	sequence01:146051..146758(+)	partial			WP_011070781.1	pyruvate dehydrogenase complex transcriptional repressor PdhR	70.2	64.0	29.7
MGA_165	LOCUS_01650	sequence01:171472..171780(-)	partial			WP_002672297.1	preprotein translocase subunit YajC	90.2	65.7	30.4
MGA_181	LOCUS_01810	sequence01:194554..194790(-)	partial			WP_000556760.1	preprotein translocase subunit SecG	70.5	72.7	51.8
MGA_186	LOCUS_01860	sequence01:199500..200369(-)	partial			WP_011837081.1	ABC transporter substrate-binding protein/permease	67.5	24.0	29.9
MGA_193	LOCUS_01930	sequence02:2..550(+)	partial			WP_002610375.1	site-specific integrase	100.0	45.8	59.3
MGA_194	LOCUS_01940	sequence02:836..2089(-)	partial			WP_021362799.1	HAMP domain-containing sensor histidine kinase	57.8	53.7	42.3
MGA_204	LOCUS_02040	sequence02:11029..11781(-)	partial			WP_009897033.1	YdcF family protein	70.4	71.0	38.6
MGA_207	LOCUS_02070	sequence02:14198..15085(-)	partial			WP_011948973.1	M14 family metallopeptidase	95.3	68.3	32.1
MGA_240	LOCUS_02400	sequence02:53157..54245(-)	partial			WP_010966511.1	PucR family transcriptional regulator	51.1	56.7	32.4
MGA_301	LOCUS_03010	sequence02:101443..102261(-)	partial			WP_012774996.1	class C sortase	76.8	72.0	45.9
MGA_303	LOCUS_03030	sequence02:103888..105825(-)	partial			WP_011837563.1	Cna B-type domain-containing protein	27.9	11.3	32.2
MGA_307	LOCUS_03070	sequence02:109037..109240(-)	partial			WP_010965669.1	small, acid-soluble spore protein, alpha/beta type	56.7	43.7	73.7
MGA_308	LOCUS_03080	sequence02:109311..109496(-)	partial			WP_010965947.1	PspC domain-containing protein	75.4	71.4	63.0
MGA_310	LOCUS_03100	sequence02:110335..111021(-)	partial			WP_012775489.1	DUF1700 domain-containing protein	32.5	29.9	41.3
MGA_322	LOCUS_03220	sequence02:128161..129039(+)	partial			WP_011475480.1	Rpn family recombination-promoting nuclease/putative transposase	72.3	83.2	33.6
MGA_328	LOCUS_03280	sequence02:134138..134941(-)	partial			WP_011986205.1	magnesium transporter	68.9	41.7	53.0
MGA_332	LOCUS_03320	sequence02:139592..140452(-)	partial			WP_011404934.1	peptidylprolyl isomerase	48.3	84.5	39.9
MGA_336	LOCUS_03360	sequence02:142918..143892(-)	partial			WP_002679418.1	RelA/SpoT domain-containing protein	53.1	39.8	28.9
MGA_340	LOCUS_03400	sequence02:151335..153251(-)	partial			WP_001035315.1	pneumococcal surface protein A	24.9	26.3	50.9
MGA_345	LOCUS_03450	sequence02:158184..158870(+)	partial			WP_012546691.1	sigma-54 dependent transcriptional regulator	90.8	46.6	28.4
MGA_353	LOCUS_03520	sequence02:164458..165324(-)	partial			WP_011475480.1	Rpn family recombination-promoting nuclease/putative transposase	53.8	59.6	35.5
MGA_364	LOCUS_03630	sequence02:173997..175466(-)	partial			WP_010966939.1	sensor histidine kinase KdpD	98.6	55.1	35.9
MGA_365	LOCUS_03640	sequence02:175463..177490(-)	partial			WP_010966939.1	sensor histidine kinase KdpD	99.4	73.3	39.9
MGA_376	LOCUS_03750	sequence02:188283..188645(-)	partial			WP_003688752.1	IS3 family transposase	57.5	23.6	69.6
MGA_380	LOCUS_03790	sequence02:191359..191967(-)	partial			WP_012256874.1	DNA methyltransferase	100.0	58.4	34.0
MGA_385	LOCUS_03830	sequence03:1..1017(+)	partial			WP_011987043.1	pyruvate:ferredoxin (flavodoxin) oxidoreductase	97.3	30.0	59.3
MGA_396	LOCUS_03940	sequence03:11097..11921(-)	partial			WP_013363043.1	glycerophosphodiester phosphodiesterase family protein	80.7	72.6	34.5
MGA_403	LOCUS_04010	sequence03:18306..18581(+)	partial			WP_005788897.1	GNAT family N-acetyltransferase	60.4	63.2	40.0
MGA_409	LOCUS_04070	sequence03:22216..23115(+)	partial			WP_011947940.1	DUF445 family protein	91.3	51.7	27.5
MGA_412	LOCUS_04100	sequence03:25754..26332(+)	partial			WP_002680559.1	HutD family protein	65.6	60.8	47.6
MGA_415	LOCUS_04130	sequence03:27559..29937(+)	partial			WP_011836477.1	transglutaminase domain-containing protein	73.9	81.0	24.9
MGA_434	LOCUS_04320	sequence03:48613..49437(+)	partial			WP_012258853.1	CehA/McbA family metallohydrolase	66.8	74.9	28.2
MGA_445	LOCUS_04430	sequence03:60825..63065(+)	partial			WP_225355414.1	C40 family peptidase	21.4	29.7	38.8
MGA_459	LOCUS_04570	sequence03:73583..74221(+)	partial			WP_009891672.1	class I SAM-dependent methyltransferase	55.7	52.8	31.8
MGA_514	LOCUS_05120	sequence03:131475..132095(+)	partial			WP_010964638.1	4'-phosphopantetheinyl transferase superfamily protein	70.4	74.1	31.4
MGA_544	LOCUS_05420	sequence03:155801..156409(+)	partial			WP_012545289.1	regulatory protein RecX	62.9	74.7	30.2
MGA_558	LOCUS_05550	sequence04:2288..2770(-)	partial			WP_015943957.1	ABC transporter ATP-binding protein	93.8	53.5	45.7
MGA_564	LOCUS_05610	sequence04:6448..7014(-)	frameshift		6486	WP_015943969.1	response regulator transcription factor	94.1	78.7	59.9
MGA_594	LOCUS_05910	sequence04:34912..35580(-)	partial			WP_003243462.1	L-Ala--D-Glu endopeptidase	68.9	47.9	40.4
MGA_596	LOCUS_05930	sequence04:37350..38195(+)	partial			WP_010965047.1	sporulation integral membrane protein YlbJ	98.9	73.5	31.3
MGA_626	LOCUS_06230	sequence04:62219..63343(+)	partial			WP_014518885.1	ribonuclease H-like domain-containing protein	48.7	66.8	26.1
MGA_627	LOCUS_06240	sequence04:63370..64455(-)	frameshift		64456	WP_010965152.1	bifunctional 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/30S ribosomal protein S1	91.4	51.9	42.8
MGA_642	LOCUS_06390	sequence04:79961..81436(-)	partial			WP_010887814.1	MoxR family ATPase	53.4	68.2	26.0
MGA_643	LOCUS_06400	sequence04:81449..82717(-)	partial			WP_011861789.1	VWA-like domain-containing protein	25.6	19.4	31.5
MGA_650	LOCUS_06470	sequence04:88702..89271(-)	partial			WP_009931856.1	membrane protein	81.5	56.7	39.4
MGA_657	LOCUS_06540	sequence04:94852..95334(-)	partial			WP_011015925.1	CinA family nicotinamide mononucleotide deamidase-related protein	90.6	35.3	44.5
MGA_665	LOCUS_06620	sequence04:101339..101839(-)	frameshift		101918	WP_011921670.1	GNAT family N-acetyltransferase	96.4	63.7	47.5
MGA_694	LOCUS_06910	sequence04:128815..129726(-)	partial			WP_000037075.1	YihY/virulence factor BrkB family protein	78.9	59.0	28.3
MGA_695	LOCUS_06920	sequence04:129766..131196(-)	partial			WP_010943259.1	SpoIID/LytB domain-containing protein	62.6	72.2	35.5
MGA_706	LOCUS_07030	sequence04:141365..142534(+)	partial			WP_011860827.1	BlaR1 family beta-lactam sensor/signal transducer	99.7	64.6	51.2
MGA_732	LOCUS_07290	sequence05:27359..28252(+)	partial			WP_002296511.1	AraC family transcriptional regulator	47.5	52.3	34.8
MGA_737	LOCUS_07340	sequence05:32084..32296(-)	partial			WP_002900787.1	helix-turn-helix transcriptional regulator	90.0	58.3	63.5
MGA_738	LOCUS_07350	sequence05:32424..33146(-)	partial			WP_001183248.1	CPBP family intramembrane metalloprotease	78.3	70.0	28.6
MGA_743	LOCUS_07400	sequence05:37762..37986(-)	partial			WP_011476020.1	arsenate reductase ArsC	89.2	48.2	74.2
MGA_748	LOCUS_07450	sequence05:40258..41598(-)	partial			WP_000162279.1	ATP-binding protein	56.7	46.6	41.5
MGA_755	LOCUS_07520	sequence05:51576..52334(+)	partial			WP_001235392.1	genetic competence negative regulator	48.8	61.4	31.2
MGA_777	LOCUS_07740	sequence05:69613..71469(+)	partial			WP_003439379.1	ferrous iron transport protein B	72.5	63.6	54.6
MGA_784	LOCUS_07810	sequence05:75489..75671(-)	frameshift		75530	WP_013390018.1	putative DNA binding domain-containing protein	68.3	8.0	65.9
MGA_786	LOCUS_07830	sequence05:76551..78098(-)	partial			WP_010966939.1	sensor histidine kinase KdpD	96.1	55.1	39.7
MGA_790	LOCUS_07870	sequence05:83384..84031(-)	partial			WP_008767538.1	ATP-binding protein	90.7	40.6	27.3
MGA_791	LOCUS_07880	sequence05:84049..84555(-)	partial			WP_011109350.1	ATP-binding protein	79.2	27.3	27.8
MGA_792	LOCUS_07890	sequence05:84665..85516(-)	partial			WP_003822863.1	M15 family metallopeptidase	65.0	71.5	43.2
MGA_812	LOCUS_08090	sequence05:108383..109702(-)	partial			WP_164929895.1	C40 family peptidase	23.7	33.4	44.2
MGA_813	LOCUS_08100	sequence05:109969..110373(+)	partial			WP_001224528.1	hypothetical protein	88.8	58.5	32.5
MGA_840	LOCUS_08370	sequence06:10252..10677(-)	partial			WP_011035740.1	DUF2752 domain-containing protein	43.3	44.9	42.6
MGA_847	LOCUS_08440	sequence06:17599..21243(-)	partial			WP_001035315.1	pneumococcal surface protein A	16.2	32.6	54.0
MGA_848	LOCUS_08450	sequence06:21392..27538(-)	partial			WP_000792779.1	bacterial Ig-like domain-containing protein	62.3	73.1	25.9
MGA_858	LOCUS_08550	sequence06:37897..38544(-)	partial			WP_002262616.1	helix-turn-helix transcriptional regulator	47.0	77.8	40.0
MGA_860	LOCUS_08570	sequence06:39103..40254(-)	partial			WP_002295129.1	polysaccharide deacetylase family protein	46.2	60.5	42.7
MGA_869	LOCUS_08660	sequence06:52555..53049(-)	partial			WP_018210986.1	hypothetical protein	62.2	71.8	34.3
MGA_874	LOCUS_08710	sequence06:56275..57012(+)	partial			WP_000253119.1	GAF domain-containing protein	81.6	29.6	36.6
MGA_875	LOCUS_08720	sequence06:57007..57669(-)	partial			WP_010990098.1	rhomboid family intramembrane serine protease	87.3	36.1	34.4
MGA_891	LOCUS_08880	sequence06:69997..71472(-)	partial			WP_000887601.1	CapA family protein	64.0	76.4	37.9
MGA_913	LOCUS_09100	sequence06:93344..93721(-)	frameshift		93800	WP_004117534.1	cysteine synthase A	100.0	40.3	64.0
MGA_914	LOCUS_09110	sequence06:93786..94274(-)	frameshift		93797	WP_011461664.1	cysteine synthase A	98.1	51.1	64.2
MGA_946	LOCUS_09420	sequence07:2079..2648(-)	partial			WP_011070739.1	SprT family zinc-dependent metalloprotease	51.9	41.4	51.0
MGA_949	LOCUS_09450	sequence07:3832..5367(-)	partial			WP_052729532.1	DNA methyltransferase	27.6	16.1	32.6
MGA_950	LOCUS_09460	sequence07:5692..6429(-)	partial			WP_011461119.1	DUF134 domain-containing protein	43.3	84.8	46.7
MGA_964	LOCUS_09600	sequence07:21254..22018(-)	partial			WP_012257458.1	SH3 domain-containing protein	78.3	37.7	30.9
MGA_970	LOCUS_09660	sequence07:27015..29774(-)	partial			WP_011460393.1	translation initiation factor IF-2	70.5	65.5	58.8
MGA_980	LOCUS_09760	sequence07:39562..39741(-)	frameshift		39848,39839	WP_001042503.1	N-acetylmuramoyl-L-alanine amidase family protein	78.0	14.0	65.2
MGA_981	LOCUS_09770	sequence07:39735..41096(-)	frameshift,internal_stop_codon	41145..41147(-)	39848,39833,39839	WP_000728266.1	phosphorylcholine esterase CbpE	98.5	60.5	24.2
MGA_982	LOCUS_09780	sequence07:41145..41426(-)	internal_stop_codon	41145..41147(-)		WP_000727870.1	phosphorylcholine esterase CbpE	79.6	12.3	46.8
MGA_984	LOCUS_09800	sequence07:43194..43373(+)	frameshift		43370	WP_003417583.1	BlaI/MecI/CopY family transcriptional regulator	100.0	46.1	69.5
MGA_985	LOCUS_09810	sequence07:43387..43581(+)	frameshift		43370	WP_003417583.1	BlaI/MecI/CopY family transcriptional regulator	100.0	50.0	50.0
MGA_986	LOCUS_09820	sequence07:44210..45382(+)	internal_stop_codon	44009..44011(+)		WP_011860827.1	BlaR1 family beta-lactam sensor/signal transducer	100.0	64.9	48.6
MGA_1018	LOCUS_10140	sequence07:80700..81725(-)	partial			WP_002681035.1	KHG/KDPG aldolase/sugar kinase fusion protein	99.7	57.6	66.2
MGA_1019	LOCUS_10150	sequence07:81748..82389(-)	partial			WP_002681035.1	KHG/KDPG aldolase/sugar kinase fusion protein	99.5	35.9	50.5
MGA_1030	LOCUS_10260	sequence07:91340..91828(-)	partial			WP_002359609.1	beta-glucoside-specific PTS transporter subunit IIABC	95.1	24.6	46.1
MGA_1054	LOCUS_10500	sequence07:118786..119145(-)	partial			WP_085938409.1	IS256 family transposase	68.9	21.2	53.6
MGA_1057	LOCUS_10520	sequence08:1137..1739(+)	partial			WP_010957266.1	hypothetical protein	39.5	8.4	35.0
MGA_1083	LOCUS_10780	sequence08:28255..29952(+)	partial			WP_002286015.1	extracellular solute-binding protein	38.2	42.0	24.8
MGA_1091	LOCUS_10860	sequence08:34849..35820(+)	partial			WP_012583893.1	nickel pincer cofactor biosynthesis protein LarC	75.5	63.8	32.7
MGA_1146	LOCUS_11410	sequence08:89596..90186(+)	partial			WP_010966303.1	histidine phosphatase family protein	77.0	70.8	34.6
MGA_1152	LOCUS_11470	sequence08:95773..96795(+)	partial			WP_011459514.1	D-alanyl-D-alanine carboxypeptidase	74.1	77.8	52.8
MGA_1154	LOCUS_11490	sequence08:97525..99186(-)	partial			WP_011023466.1	ATP-binding cassette domain-containing protein	48.8	60.0	41.4
MGA_1156	LOCUS_11510	sequence08:99986..100288(-)	partial			WP_005812269.1	energy-coupling factor ABC transporter substrate-binding protein	80.0	72.8	43.8
MGA_1159	LOCUS_11540	sequence08:102775..103218(+)	partial			WP_002456704.1	NAD(P)-binding protein	91.2	65.5	31.3
MGA_1166	LOCUS_11610	sequence08:110186..111880(-)	partial			WP_158306572.1	S8 family peptidase	88.7	43.2	34.1
MGA_1175	LOCUS_11690	sequence09:467..838(+)	partial			WP_011202293.1	virulence RhuM family protein	100.0	34.2	79.7
MGA_1190	LOCUS_11840	sequence09:12482..13315(-)	partial			WP_010964092.1	nickel pincer cofactor biosynthesis protein LarC	97.5	63.1	43.5
MGA_1209	LOCUS_12030	sequence09:33426..34631(+)	partial			WP_000694256.1	CDP-glycerol glycerophosphotransferase family protein	91.3	29.4	31.2
MGA_1210	LOCUS_12040	sequence09:34644..36029(+)	partial			WP_011090300.1	O-antigen ligase	44.5	43.6	23.7
MGA_1215	LOCUS_12090	sequence09:40493..41857(+)	partial			WP_001035315.1	pneumococcal surface protein A	30.4	22.1	45.7
MGA_1223	LOCUS_12170	sequence09:51881..52978(+)	partial			WP_010941162.1	DUF362 domain-containing protein	65.8	64.6	25.9
MGA_1245	LOCUS_12390	sequence09:73936..74319(+)	partial			WP_011461799.1	hypothetical protein	70.1	72.1	47.8
MGA_1251	LOCUS_12450	sequence09:78769..80067(+)	partial			WP_002378870.1	FMN-binding protein	58.6	79.9	32.3
MGA_1258	LOCUS_12520	sequence09:83863..86496(+)	partial			WP_011461425.1	cell wall-binding repeat-containing protein	33.5	44.6	37.1
MGA_1259	LOCUS_12530	sequence09:86502..87329(+)	partial			WP_005812448.1	DUF4430 domain-containing protein	76.0	71.6	50.2
MGA_1261	LOCUS_12550	sequence09:88198..89886(+)	partial			WP_005812452.1	ATP-binding cassette domain-containing protein	98.2	60.3	54.9
MGA_1262	LOCUS_12560	sequence09:89859..91202(+)	partial			WP_005812452.1	ATP-binding cassette domain-containing protein	54.6	26.7	51.2
MGA_1263	LOCUS_12570	sequence09:91218..92066(+)	partial			WP_036944238.1	leucine-rich repeat domain-containing protein	69.5	14.4	31.3
MGA_1265	LOCUS_12590	sequence09:92589..94328(+)	partial			WP_001035315.1	pneumococcal surface protein A	26.3	28.6	44.9
MGA_1267	LOCUS_12610	sequence09:95521..96180(+)	partial			WP_000361602.1	polysaccharide deacetylase family protein	81.7	38.7	41.3
MGA_1268	LOCUS_12620	sequence09:96197..97516(+)	partial			WP_164928938.1	AAA family ATPase	97.7	58.3	53.3
MGA_1276	LOCUS_12700	sequence10:1417..2136(-)	partial			WP_129619794.1	IS3 family transposase	97.5	49.8	35.6
MGA_1278	LOCUS_12720	sequence10:2483..2806(+)	partial			WP_003862946.1	polyamine aminopropyltransferase	66.4	13.6	38.0
MGA_1282	LOCUS_12760	sequence10:7709..13180(+)	partial			WP_013390210.1	beta-N-acetylglucosaminidase domain-containing protein	64.5	60.3	23.8
MGA_1286	LOCUS_12800	sequence10:15415..15633(+)	partial			WP_009897032.1	bifunctional diguanylate cyclase/phosphodiesterase	87.5	13.2	56.9
MGA_1291	LOCUS_12850	sequence10:20848..21882(+)	partial			WP_010881239.1	tetratricopeptide repeat protein	50.9	54.1	25.3
MGA_1321	LOCUS_13150	sequence10:55621..56223(+)	partial			WP_000044451.1	YdcF family protein	73.5	62.8	29.9
MGA_1324	LOCUS_13180	sequence10:57803..58045(-)	partial			WP_000195472.1	formate C-acetyltransferase	95.0	10.1	69.7
MGA_1347	LOCUS_13410	sequence10:87898..94773(+)	partial			WP_001032521.1	SpGH101 family endo-alpha-N-acetylgalactosaminidase	51.4	50.3	50.5
MGA_1353	LOCUS_13470	sequence10:100566..101468(-)	partial			WP_003426142.1	TlpA disulfide reductase family protein	71.7	55.6	30.1
MGA_1358	LOCUS_13520	sequence11:4017..4778(-)	partial			WP_003723014.1	biotin--[acetyl-CoA-carboxylase] ligase	93.3	70.8	36.4
MGA_1364	LOCUS_13580	sequence11:9392..10507(-)	partial			WP_001035315.1	pneumococcal surface protein A	47.4	26.2	39.9
MGA_1365	LOCUS_13590	sequence11:10820..11569(-)	partial			WP_010964545.1	LysM peptidoglycan-binding domain-containing protein	42.6	41.9	40.9
MGA_1375	LOCUS_13690	sequence11:22983..23783(-)	partial			WP_008767711.1	alpha-L-fucosidase	95.9	60.0	32.6
MGA_1377	LOCUS_13710	sequence11:25863..26432(-)	internal_stop_codon	26442..26444(-)		WP_011108688.1	glycoside hydrolase family 95 protein	98.4	22.6	39.0
MGA_1378	LOCUS_13720	sequence11:26442..28097(-)	internal_stop_codon	26442..26444(-)		WP_000780623.1	glycoside hydrolase family 95 protein	98.2	70.5	33.0
MGA_1379	LOCUS_13730	sequence11:28292..33670(-)	partial			WP_011461425.1	cell wall-binding repeat-containing protein	16.4	45.8	30.7
MGA_1380	LOCUS_13740	sequence11:34015..37626(-)	partial			WP_002399773.1	polysaccharide lyase 8 family protein	67.7	76.5	29.9
MGA_1384	LOCUS_13780	sequence11:45292..46701(+)	partial			WP_041272582.1	D-alanyl-D-alanine carboxypeptidase family protein	72.9	81.6	35.8
MGA_1392	LOCUS_13860	sequence11:50774..51586(-)	partial			WP_011837092.1	ATP-binding cassette domain-containing protein	93.0	54.9	35.5
MGA_1394	LOCUS_13880	sequence11:53043..53489(-)	frameshift		53581	WP_048065307.1	helix-turn-helix domain-containing protein	96.6	34.0	27.4
MGA_1418	LOCUS_14120	sequence11:81226..82068(-)	partial			WP_013390378.1	class C sortase	77.1	67.0	48.9
MGA_1421	LOCUS_14150	sequence11:91518..92984(-)	partial			WP_004082198.1	HD domain-containing protein	50.2	42.5	29.0
MGA_1424	LOCUS_14180	sequence11:94479..95228(-)	partial			WP_002896393.1	1-propanol dehydrogenase PduQ	98.8	70.0	42.1
MGA_1427	LOCUS_14210	sequence12:109..450(+)	partial			WP_009994642.1	hypothetical protein	85.8	32.6	43.3
MGA_1430	LOCUS_14240	sequence12:2097..2324(-)	partial			WP_010707088.1	helix-turn-helix transcriptional regulator	88.0	20.6	47.0
MGA_1436	LOCUS_14300	sequence12:5162..5659(+)	partial			WP_004080396.1	methionine--tRNA ligase	76.4	19.9	46.9
MGA_1438	LOCUS_14320	sequence12:6246..6500(+)	partial			WP_003816638.1	type II toxin-antitoxin system HipA family toxin	76.2	16.8	56.2
MGA_1439	LOCUS_14330	sequence12:6521..7084(+)	partial			WP_003816638.1	type II toxin-antitoxin system HipA family toxin	98.9	47.5	47.3
MGA_1441	LOCUS_14350	sequence12:8260..8541(+)	partial			WP_017143218.1	acylphosphatase	91.4	68.3	37.2
MGA_1443	LOCUS_14370	sequence12:9270..10667(+)	partial			WP_118839831.1	ATP-binding protein	62.4	60.3	32.8
MGA_1445	LOCUS_14390	sequence12:11512..12240(+)	partial			WP_003822863.1	M15 family metallopeptidase	76.0	72.3	48.4
MGA_1449	LOCUS_14430	sequence12:18728..18946(+)	internal_stop_codon	18983..18985(+),18944..18946(+)		WP_010965539.1	heavy metal translocating P-type ATPase	98.6	10.3	33.3
MGA_1450	LOCUS_14440	sequence12:19016..20902(+)	internal_stop_codon	18983..18985(+),18944..18946(+)		WP_000796568.1	heavy metal translocating P-type ATPase	99.2	77.8	58.0
MGA_1452	LOCUS_14460	sequence12:23539..23904(-)	partial			WP_011393689.1	metalloregulator ArsR/SmtB family transcription factor	70.2	69.2	41.2
MGA_1463	LOCUS_14570	sequence12:39162..39740(+)	partial			WP_003393623.1	TetR/AcrR family transcriptional regulator	43.2	39.1	33.7
MGA_1466	LOCUS_14600	sequence12:43671..47939(+)	partial			WP_206877616.1	RHS repeat-associated core domain-containing protein	38.9	8.4	20.3
MGA_1473	LOCUS_14670	sequence12:53919..54560(-)	partial			WP_070090119.1	IS110 family transposase	100.0	50.7	79.3
MGA_1499	LOCUS_14930	sequence12:83776..84066(-)	partial			WP_009897167.1	AraC family transcriptional regulator	84.4	27.2	34.6
MGA_1501	LOCUS_14950	sequence12:85833..90167(+)	partial			WP_194904324.1	ricin-type beta-trefoil lectin domain protein	37.6	61.6	30.2
MGA_1511	LOCUS_15040	sequence13:4815..5900(+)	partial			WP_010966511.1	PucR family transcriptional regulator	57.3	63.1	32.9
MGA_1515	LOCUS_15080	sequence13:11187..12362(+)	partial			WP_011014235.1	D-ribose ABC transporter substrate-binding protein	57.0	71.3	29.8
MGA_1533	LOCUS_15260	sequence13:27921..30179(-)	partial			WP_003723174.1	response regulator transcription factor	16.0	24.5	34.1
MGA_1551	LOCUS_15440	sequence13:47385..49127(+)	partial			WP_009903108.1	bifunctional germination protease/germinant receptor pseudoprotease CspBA	93.1	45.8	40.4
MGA_1558	LOCUS_15510	sequence13:56712..58748(+)	partial			WP_010989803.1	ABC transporter permease VirA	33.2	33.1	25.4
MGA_1576	LOCUS_15690	sequence13:79394..80104(+)	partial			WP_011986794.1	PolC-type DNA polymerase III	70.8	11.7	38.3
MGA_1579	LOCUS_15720	sequence13:81818..82009(+)	partial			WP_002680484.1	ATP-binding protein	100.0	11.6	50.8
MGA_1580	LOCUS_15730	sequence13:82029..83171(+)	frameshift,internal_stop_codon	82007..82009(+),83169..83171(+)	82018,83198	WP_005898122.1	AAA family ATPase	98.4	65.3	36.6
MGA_1585	LOCUS_15780	sequence13:88269..89546(+)	partial			WP_010880939.1	DegQ family serine endoprotease	63.1	58.7	34.2
MGA_1595	LOCUS_15860	sequence14:7638..9125(-)	partial			WP_012048377.1	stage II sporulation protein E	89.9	55.8	25.9
MGA_1611	LOCUS_16020	sequence14:21536..23245(-)	partial			WP_012868996.1	glycosyl hydrolase family 18 protein	48.9	58.7	37.2
MGA_1618	LOCUS_16090	sequence14:30521..32332(-)	partial			WP_011836931.1	sensor histidine kinase	72.5	72.8	26.4
MGA_1633	LOCUS_16240	sequence14:50225..50542(-)	partial			WP_003437587.1	metalloregulator ArsR/SmtB family transcription factor	81.0	70.2	40.0
MGA_1635	LOCUS_16260	sequence14:52694..52912(-)	partial			WP_002327795.1	heavy metal translocating P-type ATPase	94.4	9.8	37.7
MGA_1652	LOCUS_16430	sequence14:67804..68394(+)	partial			WP_012099498.1	ATP-binding protein	99.5	74.4	36.9
MGA_1662	LOCUS_16530	sequence15:6543..6836(-)	partial			WP_010964821.1	anaerobic sulfite reductase subunit AsrA	99.0	28.4	83.3
MGA_1663	LOCUS_16540	sequence15:6992..7234(-)	partial			WP_010964821.1	anaerobic sulfite reductase subunit AsrA	97.5	23.1	53.8
MGA_1667	LOCUS_16580	sequence15:8917..9192(+)	internal_stop_codon	8878..8880(+)		WP_010966865.1	HD domain-containing protein	95.6	53.4	49.4
MGA_1668	LOCUS_16590	sequence15:9199..9603(+)	partial			WP_010964930.1	pyridoxamine kinase	91.8	42.8	33.1
MGA_1670	LOCUS_16610	sequence15:10860..12011(-)	partial			WP_012775517.1	type IV secretory system conjugative DNA transfer family protein	73.9	52.2	26.5
MGA_1673	LOCUS_16640	sequence15:14319..14540(-)	partial			WP_002939394.1	DUF896 family protein	79.5	68.2	53.4
MGA_1690	LOCUS_16810	sequence15:30486..30950(-)	internal_stop_codon	31038..31040(-),31164..31166(-)		WP_011986530.1	radical SAM protein	86.4	46.4	31.3
MGA_1691	LOCUS_16820	sequence15:31336..31794(-)	frameshift,internal_stop_codon	31164..31166(-)	31916	WP_011986530.1	radical SAM protein	88.8	47.1	24.3
MGA_1692	LOCUS_16830	sequence15:31887..32234(-)	frameshift		31916	WP_002681808.1	radical SAM protein	87.0	29.9	38.0
MGA_1698	LOCUS_16890	sequence15:35272..35838(-)	partial			WP_026198805.1	peptidylprolyl isomerase	72.3	80.5	54.4
MGA_1712	LOCUS_17030	sequence15:49235..50626(-)	partial			WP_004080781.1	hemolysin family protein	71.1	72.1	39.1
MGA_1719	LOCUS_17100	sequence15:58029..58817(-)	partial			WP_011250640.1	S8 family serine peptidase	88.5	36.0	41.8
MGA_1740	LOCUS_17300	sequence16:11693..12451(+)	partial			WP_014206616.1	ABC transporter ATP-binding protein	99.2	44.4	44.1
MGA_1757	LOCUS_17470	sequence16:29372..30838(+)	partial			WP_011101396.1	AAA family ATPase	18.9	10.3	40.2
MGA_1774	LOCUS_17640	sequence16:48365..49228(+)	partial			WP_009903830.1	homocysteine S-methyltransferase family protein	96.2	35.6	33.0
MGA_1783	LOCUS_17730	sequence16:56778..57482(+)	partial			WP_010964974.1	HD domain-containing protein	59.4	79.2	47.5
MGA_1792	LOCUS_17820	sequence17:4583..6010(+)	partial			WP_011986853.1	ATP-binding protein	48.8	40.4	44.0
MGA_1793	LOCUS_17830	sequence17:6022..6960(+)	partial			WP_011392053.1	GerMN domain-containing protein	42.0	66.5	30.4
MGA_1798	LOCUS_17880	sequence17:11710..12939(+)	partial			WP_010964588.1	stage II sporulation protein P	50.6	55.1	29.6
MGA_1813	LOCUS_18030	sequence17:28766..29998(-)	partial			WP_010964579.1	D-alanyl-D-alanine carboxypeptidase family protein	63.7	63.1	39.8
MGA_1814	LOCUS_18040	sequence17:30186..31784(+)	partial			WP_071542382.1	trypsin-like peptidase domain-containing protein	66.5	81.7	35.9
MGA_1820	LOCUS_18100	sequence17:39824..40291(+)	frameshift		39819,39540	WP_001178657.1	threonine/serine exporter family protein	91.0	35.6	36.7
MGA_1855	LOCUS_18440	sequence18:17298..18167(+)	partial			WP_011475480.1	Rpn family recombination-promoting nuclease/putative transposase	61.9	69.6	36.1
MGA_1869	LOCUS_18580	sequence18:26939..27130(+)	partial			WP_003423177.1	helix-turn-helix transcriptional regulator	68.3	55.8	81.4
MGA_1874	LOCUS_18630	sequence18:29124..29597(+)	partial			WP_010964147.1	VanZ family protein	87.3	46.1	30.3
MGA_1877	LOCUS_18660	sequence18:30526..32574(+)	partial			WP_003729641.1	M29 family aminopeptidase T	25.7	44.1	28.0
MGA_1894	LOCUS_18830	sequence18:48928..49749(+)	partial			WP_011964264.1	virulence RhuM family protein	89.7	72.0	62.0
MGA_1895	LOCUS_18840	sequence18:49701..50624(+)	partial			WP_011861117.1	type IV secretory system conjugative DNA transfer family protein	99.3	51.4	72.5
MGA_1896	LOCUS_18850	sequence18:50838..53123(+)	partial			WP_011390036.1	protein kinase	23.8	43.1	32.7
MGA_1897	LOCUS_18860	sequence18:53447..53587(+)	partial			WP_002610321.1	Maff2 family protein	93.5	60.6	69.8
MGA_1903	LOCUS_18920	sequence19:1762..2271(-)	partial			WP_002225656.1	NeuD/PglB/VioB family sugar acetyltransferase	94.1	39.7	40.9
MGA_1907	LOCUS_18960	sequence19:5784..6320(-)	partial			WP_002294234.1	chorismate mutase	40.4	25.7	54.2
MGA_1914	LOCUS_19030	sequence19:13077..14117(-)	partial			WP_011022158.1	glycosyltransferase family 4 protein	46.8	45.2	30.3
MGA_1915	LOCUS_19040	sequence19:14149..15330(-)	partial			WP_164924818.1	glycosyltransferase family 4 protein	71.8	75.2	28.2
MGA_1931	LOCUS_19200	sequence19:30887..31585(-)	partial			WP_011030752.1	carbohydrate ABC transporter permease	40.1	31.7	49.5
MGA_1932	LOCUS_19210	sequence19:31621..31968(-)	partial			WP_010922507.1	response regulator	91.3	42.7	41.9
MGA_1933	LOCUS_19220	sequence19:31970..33133(-)	partial			WP_002356857.1	sensor histidine kinase	72.4	48.3	33.5
MGA_1937	LOCUS_19260	sequence19:34973..35539(+)	partial			WP_000720201.1	M15 family metallopeptidase	91.5	68.3	44.1
MGA_1949	LOCUS_19380	sequence19:46064..46930(-)	partial			WP_171463760.1	M23 family metallopeptidase	37.8	23.3	28.4
MGA_1957	LOCUS_19460	sequence19:53276..54319(-)	partial			WP_001042503.1	N-acetylmuramoyl-L-alanine amidase family protein	51.3	55.9	39.1
MGA_1960	LOCUS_19490	sequence20:1486..2613(+)	partial			WP_011461990.1	DUF3991 domain-containing protein	79.2	60.2	29.6
MGA_1964	LOCUS_19530	sequence20:4252..5307(+)	partial			WP_047936604.1	ArdC-like ssDNA-binding domain-containing protein	95.7	43.2	27.1
MGA_1974	LOCUS_19630	sequence20:14534..15007(+)	partial			WP_010964554.1	DNA repair protein RadC	76.4	51.5	41.7
MGA_1980	LOCUS_19690	sequence20:18011..20635(+)	partial			WP_011458828.1	MobP3 family relaxase	38.6	33.5	31.6
MGA_1994	LOCUS_19830	sequence20:29087..34024(+)	partial			WP_211477941.1	SpaA isopeptide-forming pilin-related protein	54.7	58.6	31.2
MGA_1999	LOCUS_19880	sequence20:36458..38854(+)	partial			WP_011244838.1	type IV secretory system conjugative DNA transfer family protein	47.1	35.9	9.9
MGA_2000	LOCUS_19890	sequence20:38847..40835(+)	partial			WP_011674158.1	hypothetical protein	68.6	62.5	22.2
MGA_2004	LOCUS_19930	sequence20:43709..44812(+)	partial			WP_011860789.1	CHAP domain-containing protein	35.7	17.5	38.1
MGA_2008	LOCUS_19970	sequence21:687..1286(-)	partial			WP_003435607.1	ribonuclease PH	94.0	41.9	50.0
MGA_2011	LOCUS_20000	sequence21:3116..3451(-)	partial			WP_002208497.1	CoA-disulfide reductase	79.3	16.1	36.0
MGA_2016	LOCUS_20050	sequence21:7486..8607(-)	partial			WP_010964264.1	ComEC/Rec2 family competence protein	71.6	83.8	38.7
MGA_2022	LOCUS_20110	sequence21:12671..14326(-)	partial			WP_011947972.1	Ger(x)C family spore germination protein	29.2	41.7	24.7
MGA_2035	LOCUS_20240	sequence21:30610..31020(+)	partial			WP_002682287.1	Rpn family recombination-promoting nuclease/putative transposase	67.6	33.2	42.3
MGA_2045	LOCUS_20340	sequence21:40157..41470(-)	partial			WP_004454079.1	putative ABC transporter permease	44.6	71.8	33.8
MGA_2047	LOCUS_20360	sequence21:42440..43276(-)	partial			WP_012099505.1	N-acetylmuramoyl-L-alanine amidase	61.5	17.1	47.4
MGA_2050	LOCUS_20390	sequence22:566..2017(+)	partial			WP_011055960.1	DNA-directed RNA polymerase subunit alpha	14.9	20.9	43.1
MGA_2055	LOCUS_20440	sequence22:4153..4746(+)	partial			WP_002287705.1	site-specific integrase	91.4	38.7	29.0
MGA_2066	LOCUS_20550	sequence22:17707..20601(+)	partial			WP_010942721.1	penicillin-binding protein 2	33.6	53.5	33.1
MGA_2071	LOCUS_20600	sequence22:23277..24281(+)	partial			WP_011459514.1	D-alanyl-D-alanine carboxypeptidase	38.3	40.4	39.6
MGA_2076	LOCUS_20650	sequence22:27503..28081(+)	partial			WP_003416162.1	cell division protein SepF	39.6	50.7	45.5
MGA_2091	LOCUS_20800	sequence23:373..2010(-)	partial			WP_001035315.1	pneumococcal surface protein A	40.2	35.2	43.3
MGA_2097	LOCUS_20860	sequence23:8093..8794(+)	partial			WP_005811135.1	bifunctional 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/30S ribosomal protein S1	75.1	26.5	41.8
MGA_2108	LOCUS_20970	sequence23:20762..22285(-)	partial			WP_011948717.1	AraC family transcriptional regulator	19.9	39.7	40.6
MGA_2110	LOCUS_20990	sequence23:24107..25390(-)	partial			WP_011969647.1	extracellular solute-binding protein	70.5	70.3	22.1
MGA_2137	LOCUS_21260	sequence24:12089..13177(+)	partial			WP_005815048.1	GTP-binding protein	53.6	55.4	49.0
MGA_2155	LOCUS_21440	sequence24:32947..>33638(-)	partial			WP_011861907.1	site-specific integrase	100.0	58.1	99.6
MGA_2161	LOCUS_21500	sequence25:4890..5843(+)	partial			WP_011057729.1	alpha/beta fold hydrolase	71.6	77.0	26.3
MGA_2169	LOCUS_21580	sequence25:15023..15823(-)	partial			WP_003398827.1	protein jag	54.5	69.2	57.5
MGA_2170	LOCUS_21590	sequence25:15843..17123(-)	partial			WP_015777156.1	membrane protein insertase YidC	21.4	23.5	47.3
MGA_2176	LOCUS_21650	sequence25:21411..21620(+)	partial			WP_003857164.1	RNA-binding S4 domain-containing protein	82.6	58.8	61.4
MGA_2182	LOCUS_21710	sequence25:28578..29384(-)	partial			WP_003723174.1	response regulator transcription factor	36.9	19.8	41.4
MGA_2245	LOCUS_22310	sequence28:3165..5813(-)	partial			WP_010886723.1	YhgE/Pip domain-containing protein	72.8	42.9	25.3
MGA_2249	LOCUS_22350	sequence28:10635..11489(-)	partial			WP_011475480.1	Rpn family recombination-promoting nuclease/putative transposase	59.5	65.2	36.7
MGA_2250	LOCUS_22360	sequence28:11649..12191(-)	partial			WP_015943945.1	ferritin family protein	98.3	45.2	66.1
MGA_2260	LOCUS_22460	sequence28:21972..22715(-)	partial			WP_003358052.1	RNA polymerase sigma factor RpoD	94.7	65.4	22.7
MGA_2275	LOCUS_22610	sequence29:6999..8126(-)	partial			WP_000753855.1	choline-binding protein PcpA	58.4	28.6	41.1
MGA_2281	LOCUS_22670	sequence29:13580..16768(-)	partial			WP_211477941.1	SpaA isopeptide-forming pilin-related protein	52.4	36.0	26.9
MGA_2298	LOCUS_22830	sequence30:7111..7290(-)	partial			WP_011405200.1	response regulator transcription factor	94.9	24.1	38.3
MGA_2299	LOCUS_22840	sequence30:7313..7504(-)	partial			WP_004080225.1	PspC domain-containing protein	90.5	44.9	52.6
MGA_2307	LOCUS_22920	sequence30:14376..15674(-)	partial			WP_003242515.1	aminopeptidase YwaD	26.6	25.9	38.1
MGA_2312	LOCUS_22970	sequence30:20298..20948(-)	partial			WP_011461690.1	DUF2275 domain-containing protein	44.0	25.3	34.7
MGA_2314	LOCUS_22990	sequence30:21581..22054(-)	partial			WP_000402394.1	helix-turn-helix transcriptional regulator	93.0	74.1	49.3
MGA_2318	LOCUS_23030	sequence31:2004..3287(-)	partial			WP_011459065.1	TRAP transporter large permease subunit	97.0	66.5	41.4
MGA_2343	LOCUS_23280	sequence32:3163..3642(+)	partial			WP_005814803.1	Mov34/MPN/PAD-1 family protein	68.6	68.4	29.7
MGA_2354	LOCUS_23390	sequence32:13650..14285(+)	partial			WP_021365081.1	endonuclease III	93.8	50.4	43.9
MGA_2370	LOCUS_23530	sequence33:3378..4589(+)	partial			WP_000753855.1	choline-binding protein PcpA	58.8	34.9	38.1
MGA_2380	LOCUS_23630	sequence33:12767..13510(+)	partial			WP_041272859.1	metallophosphoesterase	98.4	65.6	34.9
MGA_2384	LOCUS_23660	sequence34:1..932(+)	partial			WP_011949176.1	relaxase/mobilization nuclease domain-containing protein	53.4	62.5	37.9
MGA_2386	LOCUS_23680	sequence34:1690..3411(+)	partial			WP_000146974.1	type I restriction-modification system subunit M	51.7	60.6	27.6
MGA_2393	LOCUS_23740	sequence35:240..857(+)	partial			WP_003897325.1	DUF4956 domain-containing protein	79.0	67.6	25.0
MGA_2399	LOCUS_23800	sequence35:4662..6590(-)	partial			WP_011674154.1	DUF5011 domain-containing protein	23.4	27.4	43.8
MGA_2403	LOCUS_23840	sequence35:7932..8354(+)	partial			WP_003642847.1	BCCT family transporter	92.9	23.4	43.1
MGA_2405	LOCUS_23860	sequence35:9217..10059(-)	partial			WP_000725079.1	N-acetylmuramoyl-L-alanine amidase family protein	28.2	22.4	49.0
MGA_2408	LOCUS_23880	sequence36:196..603(+)	partial			WP_015943957.1	ABC transporter ATP-binding protein	97.8	45.0	33.3
MGA_2421	LOCUS_24010	sequence36:8908..9375(+)	partial			WP_000353149.1	ABC transporter ATP-binding protein	98.7	70.6	58.4
MGA_2430	LOCUS_24090	sequence37:8026..8568(-)	partial			WP_012545806.1	signal peptidase I	75.0	65.7	34.0
MGA_2436	LOCUS_24140	sequence38:4959..6467(+)	partial			WP_001557544.1	site-specific integrase	81.9	66.0	24.8
MGA_2442	LOCUS_24190	sequence39:882..1745(-)	partial			WP_011970686.1	class I SAM-dependent methyltransferase	55.1	58.3	27.2
MGA_2443	LOCUS_24200	sequence39:1959..2186(-)	partial			WP_001140406.1	TnpV protein	98.7	59.7	48.6
MGA_2449	LOCUS_24260	sequence39:5936..6355(-)	partial			WP_015776847.1	ABC transporter ATP-binding protein	81.3	17.6	39.8
MGA_2450	LOCUS_24270	sequence39:6270..6575(-)	partial			WP_002399687.1	DNA polymerase	85.1	13.0	64.0
MGA_2455	LOCUS_24310	sequence40:2802..3416(-)	partial			WP_164929240.1	NUDIX hydrolase	49.0	51.7	40.0