{
    "type": "genome",
    "identifier": "GCA_905207815.1",
    "organism": "uncultured Muribaculaceae bacterium",
    "title": "uncultured Muribaculaceae bacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "EMG",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_905207815.1",
        "bioproject": "PRJEB37358",
        "biosample": "SAMEA7847653",
        "wgs_master": "CAJLMT000000000.1",
        "refseq_category": "na",
        "taxid": "2301481",
        "species_taxid": "2301481",
        "organism_name": "uncultured Muribaculaceae bacterium",
        "infraspecific_name": "",
        "isolate": "ERR414314-bin.24",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/02/04",
        "asm_name": "ERR414314-mag-bin.24",
        "submitter": "EMG",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/905/207/815/GCA_905207815.1_ERR414314-mag-bin.24",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-02-04",
    "dateModified": "2021-02-04",
    "datePublished": "2021-02-04",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Muribaculaceae bacterium"
        ],
        "sample_taxid": [
            "2301481"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Denmark"
        ],
        "sample_host_location_id": [],
        "data_size": "0.772 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2688685",
        "Number of Sequences": "53",
        "Longest Sequences (bp)": "241377",
        "N50 (bp)": "108176",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "51.2",
        "Number of CDSs": "2249",
        "Average Protein Length": "345.8",
        "Coding Ratio (%)": "86.8",
        "Number of rRNAs": "0",
        "Number of tRNAs": "50",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Duncaniella muris",
                "strain": "strain=DSM 103720",
                "accession": "GCA_003024805.1",
                "taxid": 2094150,
                "species_taxid": 2094150,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.1194,
                "matched_fragments": 128,
                "total_fragments": 873,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Duncaniella dubosii",
                "strain": "strain=H5",
                "accession": "GCA_004803915.1",
                "taxid": 2518971,
                "species_taxid": 2518971,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.0216,
                "matched_fragments": 101,
                "total_fragments": 873,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Muribaculum intestinale",
                "strain": "strain=YL27",
                "accession": "GCA_001688845.2",
                "taxid": 1796646,
                "species_taxid": 1796646,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.8358,
                "matched_fragments": 99,
                "total_fragments": 873,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Muribaculum intestinale",
                "strain": "strain=YL27",
                "accession": "GCA_002201515.1",
                "taxid": 1796646,
                "species_taxid": 1796646,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.8133,
                "matched_fragments": 101,
                "total_fragments": 873,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Muribaculum intestinale",
                "strain": "strain=YL27",
                "accession": "GCA_016696845.1",
                "taxid": 1796646,
                "species_taxid": 1796646,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.8083,
                "matched_fragments": 102,
                "total_fragments": 873,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paramuribaculum intestinale",
                "strain": "strain=DSM 100749",
                "accession": "GCA_003024925.1",
                "taxid": 2094151,
                "species_taxid": 2094151,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.6183,
                "matched_fragments": 92,
                "total_fragments": 873,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Duncaniella freteri",
                "strain": "strain=TLL-A3",
                "accession": "GCA_004766125.1",
                "taxid": 2530391,
                "species_taxid": 2530391,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.2781,
                "matched_fragments": 87,
                "total_fragments": 873,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Heminiphilus faecis",
                "strain": "strain=AM35",
                "accession": "GCA_008728965.1",
                "taxid": 2601703,
                "species_taxid": 2601703,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.277,
                "matched_fragments": 80,
                "total_fragments": 873,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_001689515.1",
                "gtdb_species": "s__Amulumruptor sp001689515",
                "ani": 95.1712,
                "matched_fragments": 726,
                "total_fragments": 873,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__Amulumruptor",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.75",
                "min_intra_species_ani": "95.14",
                "mean_intra_species_af": "0.86",
                "min_intra_species_af": "0.81",
                "num_clustered_genomes": 6,
                "status": "conclusive"
            },
            {
                "accession": "GCA_900539915.1",
                "gtdb_species": "s__Amulumruptor sp900539915",
                "ani": 84.5106,
                "matched_fragments": 551,
                "total_fragments": 873,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__Amulumruptor",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.54",
                "min_intra_species_ani": "97.54",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_001941205.1",
                "gtdb_species": "s__Amulumruptor caecigallinarius",
                "ani": 81.3393,
                "matched_fragments": 468,
                "total_fragments": 873,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__Amulumruptor",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.14",
                "min_intra_species_ani": "97.14",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 7,
                "status": "-"
            },
            {
                "accession": "GCF_003024805.1",
                "gtdb_species": "s__Duncaniella muris",
                "ani": 78.1194,
                "matched_fragments": 128,
                "total_fragments": 873,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__Duncaniella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.34",
                "min_intra_species_ani": "97.90",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.80",
                "num_clustered_genomes": 17,
                "status": "-"
            },
            {
                "accession": "GCA_001689495.1",
                "gtdb_species": "s__Duncaniella sp001689495",
                "ani": 77.8007,
                "matched_fragments": 115,
                "total_fragments": 873,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__Duncaniella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.23",
                "min_intra_species_ani": "99.23",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.93",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_910587185.1",
                "gtdb_species": "s__Paramuribaculum sp910587185",
                "ani": 77.7655,
                "matched_fragments": 76,
                "total_fragments": 873,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__Paramuribaculum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.59",
                "min_intra_species_ani": "96.53",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCA_014802015.1",
                "gtdb_species": "s__Duncaniella sp014802015",
                "ani": 77.7361,
                "matched_fragments": 90,
                "total_fragments": 873,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__Duncaniella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_910577255.1",
                "gtdb_species": "s__Duncaniella sp910577255",
                "ani": 77.6468,
                "matched_fragments": 105,
                "total_fragments": 873,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__Duncaniella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003762875.1",
                "gtdb_species": "s__Duncaniella sp001689575",
                "ani": 77.6065,
                "matched_fragments": 122,
                "total_fragments": 873,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__Duncaniella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.25",
                "min_intra_species_ani": "96.19",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.80",
                "num_clustered_genomes": 7,
                "status": "-"
            },
            {
                "accession": "GCA_900759815.1",
                "gtdb_species": "s__HGM05190 sp900759815",
                "ani": 77.6057,
                "matched_fragments": 106,
                "total_fragments": 873,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__HGM05190",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_014802445.1",
                "gtdb_species": "s__CAG-1031 sp014802445",
                "ani": 77.5913,
                "matched_fragments": 98,
                "total_fragments": 873,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__CAG-1031",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.18",
                "min_intra_species_ani": "98.18",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.94",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_910586665.1",
                "gtdb_species": "s__Duncaniella sp910586665",
                "ani": 77.5575,
                "matched_fragments": 118,
                "total_fragments": 873,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__Duncaniella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_001701225.1",
                "gtdb_species": "s__Duncaniella sp001701225",
                "ani": 77.4543,
                "matched_fragments": 91,
                "total_fragments": 873,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__Duncaniella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.71",
                "min_intra_species_ani": "98.22",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_014801655.1",
                "gtdb_species": "s__Paramuribaculum sp014801655",
                "ani": 77.4366,
                "matched_fragments": 94,
                "total_fragments": 873,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__Paramuribaculum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.33",
                "min_intra_species_ani": "97.11",
                "mean_intra_species_af": "0.75",
                "min_intra_species_af": "0.73",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCF_004766125.1",
                "gtdb_species": "s__Duncaniella freteri",
                "ani": 77.3077,
                "matched_fragments": 86,
                "total_fragments": 873,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__Duncaniella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.17",
                "min_intra_species_ani": "98.83",
                "mean_intra_species_af": "0.96",
                "min_intra_species_af": "0.95",
                "num_clustered_genomes": 6,
                "status": "-"
            },
            {
                "accession": "GCA_900546365.1",
                "gtdb_species": "s__Paramuribaculum sp900546365",
                "ani": 77.2667,
                "matched_fragments": 100,
                "total_fragments": 873,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__Paramuribaculum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_001701065.1",
                "gtdb_species": "s__Muribaculum sp001701065",
                "ani": 76.2758,
                "matched_fragments": 53,
                "total_fragments": 873,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__Muribaculum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": 3306764.5,
        "gc_content": 50.1,
        "coding_genes": 2641.0,
        "rRNA16S_genes": null,
        "tRNA_genes": 54.0,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Muribaculaceae",
        "g__Amulumruptor",
        "s__Amulumruptor sp947039275"
    ],
    "_genome_taxon": [
        "uncultured",
        "Muribaculaceae",
        "bacterium",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Muribaculaceae",
        "g__Amulumruptor",
        "s__Amulumruptor sp947039275",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Bacteroidales",
        "Muribaculaceae",
        "Amulumruptor",
        "Amulumruptor",
        "sp947039275"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}