{
    "type": "genome",
    "identifier": "GCA_905371995.1",
    "organism": "Lautropia dentalis",
    "title": "Lautropia dentalis",
    "description": "derived from metagenome; incomplete metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "EMG",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_905371995.1",
        "bioproject": "PRJEB43277",
        "biosample": "SAMEA8395134",
        "wgs_master": "CAJPOB000000000.1",
        "refseq_category": "na",
        "taxid": "2490857",
        "species_taxid": "2490857",
        "organism_name": "Lautropia dentalis",
        "infraspecific_name": "",
        "isolate": "SRR9217399-mag-bin.3",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/03/26",
        "asm_name": "SRR9217399-mag-bin.3",
        "submitter": "EMG",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/905/371/995/GCA_905371995.1_SRR9217399-mag-bin.3",
        "excluded_from_refseq": "derived from metagenome; incomplete metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-03-26",
    "dateModified": "2021-03-26",
    "datePublished": "2021-03-26",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Lautropia dentalis"
        ],
        "sample_taxid": [
            "2490857"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "not provided"
        ],
        "sample_host_location_id": [],
        "data_size": "0.634 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 29.17,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2288926",
        "Number of Sequences": "402",
        "Longest Sequences (bp)": "26408",
        "N50 (bp)": "6441",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "65.9",
        "Number of CDSs": "1491",
        "Average Protein Length": "334.4",
        "Coding Ratio (%)": "65.3",
        "Number of rRNAs": "0",
        "Number of tRNAs": "24",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Lautropia dentalis",
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                "relation_to_type": "type",
                "validated": true,
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                "total_fragments": 557,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Lautropia mirabilis",
                "strain": "strain=NCTC12852",
                "accession": "GCA_900637555.1",
                "taxid": 47671,
                "species_taxid": 47671,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Lautropia mirabilis",
                "strain": "strain=ATCC 51599",
                "accession": "GCA_000186425.1",
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                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 404,
                "total_fragments": 557,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pigmentiphaga kullae",
                "strain": "strain=K24",
                "accession": "GCA_004216695.1",
                "taxid": 151784,
                "species_taxid": 151784,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 115,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Ideonella dechloratans",
                "strain": "strain=CCUG 30977",
                "accession": "GCA_021049305.1",
                "taxid": 36863,
                "species_taxid": 36863,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.8092,
                "matched_fragments": 112,
                "total_fragments": 557,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cupriavidus numazuensis",
                "strain": "strain=LMG 26411",
                "accession": "GCA_905397435.1",
                "taxid": 221992,
                "species_taxid": 221992,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.8012,
                "matched_fragments": 85,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Candidimonas humi",
                "strain": "strain=DSM 25336",
                "accession": "GCA_019166065.1",
                "taxid": 683355,
                "species_taxid": 683355,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.6801,
                "matched_fragments": 77,
                "total_fragments": 557,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Ralstonia pseudosolanacearum",
                "strain": "strain=LMG 9673",
                "accession": "GCA_024925465.1",
                "taxid": 1310165,
                "species_taxid": 1310165,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.6026,
                "matched_fragments": 114,
                "total_fragments": 557,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Ralstonia pseudosolanacearum",
                "strain": "strain=LMG 9673",
                "accession": "GCA_919586305.1",
                "taxid": 1310165,
                "species_taxid": 1310165,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.553,
                "matched_fragments": 117,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sphaerotilus sulfidivorans",
                "strain": "strain=D-501",
                "accession": "GCA_013426975.1",
                "taxid": 639200,
                "species_taxid": 639200,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.4602,
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                "total_fragments": 557,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 29.17,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
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            {
                "accession": "GCF_003892345.1",
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                "matched_fragments": 544,
                "total_fragments": 557,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Lautropia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.32",
                "min_intra_species_ani": "98.32",
                "mean_intra_species_af": "0.98",
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                "num_clustered_genomes": 2,
                "status": "conclusive"
            },
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                "accession": "GCF_900637555.1",
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                "total_fragments": 557,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Lautropia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.31",
                "min_intra_species_ani": "96.25",
                "mean_intra_species_af": "0.97",
                "min_intra_species_af": "0.95",
                "num_clustered_genomes": 6,
                "status": "-"
            },
            {
                "accession": "GCF_008039575.1",
                "gtdb_species": "s__SCN-69-89 sp008039575",
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                "total_fragments": 557,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__SCN-69-89",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
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                "status": "-"
            },
            {
                "accession": "GCA_001724315.1",
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                "total_fragments": 557,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__SCN-69-89",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
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                "status": "-"
            },
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                "accession": "GCA_012513675.1",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCF_003854895.1",
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCF_002188465.1",
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                "matched_fragments": 96,
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_903898725.1",
                "gtdb_species": "s__UBA4615 sp903898725",
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                "total_fragments": 557,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__UBA4615",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": 35.0,
        "optimum_tmp": 35.0,
        "optimum_ph": null,
        "genome_size": 3137198.0,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
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        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": 0.0,
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        "aerobic_respiration": 1.0,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Burkholderiales",
        "f__Burkholderiaceae",
        "g__Lautropia",
        "s__Lautropia dentalis"
    ],
    "_genome_taxon": [
        "Lautropia",
        "dentalis",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Burkholderiales",
        "f__Burkholderiaceae",
        "g__Lautropia",
        "s__Lautropia dentalis",
        "Bacteria",
        "Pseudomonadota",
        "Gammaproteobacteria",
        "Burkholderiales",
        "Burkholderiaceae",
        "Lautropia",
        "Lautropia",
        "dentalis"
    ],
    "_meo": [
        {
            "id": "MEO_0000467",
            "label": "oral cavity"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}