{
    "type": "genome",
    "identifier": "GCA_905479225.1",
    "organism": "uncultured SAR86 cluster bacterium",
    "title": "uncultured SAR86 cluster bacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_905479225.1",
        "bioproject": "PRJEB38290",
        "biosample": "SAMEA8498506",
        "wgs_master": "CAJQLR000000000.1",
        "refseq_category": "na",
        "taxid": "648174",
        "species_taxid": "648174",
        "organism_name": "uncultured SAR86 cluster bacterium",
        "infraspecific_name": "",
        "isolate": "0.2_20180522_Bin_MAXBIN_101_sub_1",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/04/15",
        "asm_name": "0.2_20180522_Bin_MAXBIN_101_sub_1",
        "submitter": "MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/905/479/225/GCA_905479225.1_0.2_20180522_Bin_MAXBIN_101_sub_1",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-04-15",
    "dateModified": "2021-04-15",
    "datePublished": "2021-04-15",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured SAR86 cluster bacterium"
        ],
        "sample_taxid": [
            "648174"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "North Sea"
        ],
        "sample_host_location_id": [],
        "data_size": "0.318 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 75.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1109545",
        "Number of Sequences": "24",
        "Longest Sequences (bp)": "141523",
        "N50 (bp)": "74218",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "39.6",
        "Number of CDSs": "1097",
        "Average Protein Length": "314.6",
        "Coding Ratio (%)": "93.3",
        "Number of rRNAs": "1",
        "Number of tRNAs": "31",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 75.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_002469975.1",
                "gtdb_species": "s__D2472 sp002469975",
                "ani": 99.3464,
                "matched_fragments": 291,
                "total_fragments": 359,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__SAR86;f__D2472;g__D2472",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.56",
                "min_intra_species_ani": "99.38",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.81",
                "num_clustered_genomes": 4,
                "status": "conclusive"
            },
            {
                "accession": "GCA_002358345.1",
                "gtdb_species": "s__D2472 sp002358345",
                "ani": 82.2971,
                "matched_fragments": 269,
                "total_fragments": 359,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__SAR86;f__D2472;g__D2472",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.61",
                "min_intra_species_ani": "97.74",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 27,
                "status": "-"
            },
            {
                "accession": "GCA_905181595.1",
                "gtdb_species": "s__D2472 sp905181595",
                "ani": 80.1201,
                "matched_fragments": 193,
                "total_fragments": 359,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__SAR86;f__D2472;g__D2472",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_000307935.1",
                "gtdb_species": "s__D2472 sp000307935",
                "ani": 77.8546,
                "matched_fragments": 93,
                "total_fragments": 359,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__SAR86;f__D2472;g__D2472",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902599315.1",
                "gtdb_species": "s__D2472 sp902599315",
                "ani": 77.584,
                "matched_fragments": 79,
                "total_fragments": 359,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__SAR86;f__D2472;g__D2472",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.18",
                "min_intra_species_ani": "96.37",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_902596165.1",
                "gtdb_species": "s__D2472 sp902596165",
                "ani": 77.3064,
                "matched_fragments": 103,
                "total_fragments": 359,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__SAR86;f__D2472;g__D2472",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902515775.1",
                "gtdb_species": "s__D2472 sp902515775",
                "ani": 77.2211,
                "matched_fragments": 67,
                "total_fragments": 359,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__SAR86;f__D2472;g__D2472",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902623685.1",
                "gtdb_species": "s__D2472 sp902623685",
                "ani": 77.2178,
                "matched_fragments": 75,
                "total_fragments": 359,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__SAR86;f__D2472;g__D2472",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.90",
                "min_intra_species_ani": "99.90",
                "mean_intra_species_af": "0.83",
                "min_intra_species_af": "0.83",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_902515455.1",
                "gtdb_species": "s__D2472 sp902515455",
                "ani": 77.1257,
                "matched_fragments": 76,
                "total_fragments": 359,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__SAR86;f__D2472;g__D2472",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__SAR86",
        "f__D2472",
        "g__D2472",
        "s__D2472 sp002469975"
    ],
    "_genome_taxon": [
        "uncultured",
        "SAR86",
        "cluster",
        "bacterium",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__SAR86",
        "f__D2472",
        "g__D2472",
        "s__D2472 sp002469975",
        "Bacteria",
        "Pseudomonadota",
        "Gammaproteobacteria",
        "SAR86",
        "D2472",
        "D2472",
        "D2472",
        "sp002469975"
    ],
    "_meo": [
        {
            "id": "MEO_0000041",
            "label": "marine water"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}